Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NRZ32_RS00865 | Genome accession | NZ_CP102368 |
| Coordinates | 178155..178475 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain BC18 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 173155..183475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRZ32_RS00845 (NRZ32_00845) | - | 173457..174134 (-) | 678 | WP_005309566.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| NRZ32_RS00850 (NRZ32_00850) | - | 174491..175462 (+) | 972 | WP_005309570.1 | response regulator | - |
| NRZ32_RS00855 (NRZ32_00855) | - | 175538..176935 (-) | 1398 | WP_017783362.1 | peptide MFS transporter | - |
| NRZ32_RS00860 (NRZ32_00860) | galU | 177149..178060 (-) | 912 | WP_139726426.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NRZ32_RS00865 (NRZ32_00865) | comEA | 178155..178475 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| NRZ32_RS00870 (NRZ32_00870) | cysQ | 178642..179412 (+) | 771 | WP_268038017.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NRZ32_RS00875 (NRZ32_00875) | - | 179490..179786 (-) | 297 | WP_095593382.1 | YciI family protein | - |
| NRZ32_RS00880 (NRZ32_00880) | - | 179811..180374 (-) | 564 | WP_005309592.1 | septation protein A | - |
| NRZ32_RS00885 (NRZ32_00885) | - | 180479..181984 (-) | 1506 | WP_268038018.1 | pyridoxal-dependent decarboxylase | - |
| NRZ32_RS00890 (NRZ32_00890) | trhA | 182203..182838 (+) | 636 | WP_010636289.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=716545 NRZ32_RS00865 WP_005309580.1 178155..178475(-) (comEA) [Aeromonas dhakensis strain BC18]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=716545 NRZ32_RS00865 WP_005309580.1 178155..178475(-) (comEA) [Aeromonas dhakensis strain BC18]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAACTTGCCGATGTCAGCGGTATCGGGCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAACTTGCCGATGTCAGCGGTATCGGGCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |