Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NRZ33_RS04220 | Genome accession | NZ_CP102364 |
| Coordinates | 869303..869623 (-) | Length | 106 a.a. |
| NCBI ID | WP_076362890.1 | Uniprot ID | - |
| Organism | Aeromonas hydrophila strain BC13 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 864303..874623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRZ33_RS04200 (NRZ33_04200) | - | 864624..865301 (-) | 678 | WP_268032216.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| NRZ33_RS04205 (NRZ33_04205) | - | 865642..866613 (+) | 972 | WP_268032217.1 | response regulator | - |
| NRZ33_RS04210 (NRZ33_04210) | - | 866686..868083 (-) | 1398 | WP_017783362.1 | peptide MFS transporter | - |
| NRZ33_RS04215 (NRZ33_04215) | galU | 868297..869208 (-) | 912 | WP_029305299.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NRZ33_RS04220 (NRZ33_04220) | comEA | 869303..869623 (-) | 321 | WP_076362890.1 | ComEA family DNA-binding protein | Machinery gene |
| NRZ33_RS04225 (NRZ33_04225) | cysQ | 869791..870561 (+) | 771 | WP_175610396.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NRZ33_RS04230 (NRZ33_04230) | - | 870642..870938 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| NRZ33_RS04235 (NRZ33_04235) | - | 870964..871515 (-) | 552 | WP_016351858.1 | septation protein A | - |
| NRZ33_RS04240 (NRZ33_04240) | - | 871620..873125 (-) | 1506 | WP_268032218.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRZ33_RS04245 (NRZ33_04245) | trhA | 873350..873985 (+) | 636 | WP_268032219.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11217.05 Da Isoelectric Point: 9.5773
>NTDB_id=716444 NRZ33_RS04220 WP_076362890.1 869303..869623(-) (comEA) [Aeromonas hydrophila strain BC13]
MNYKTLTATLLLSCLPLFSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLFSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=716444 NRZ33_RS04220 WP_076362890.1 869303..869623(-) (comEA) [Aeromonas hydrophila strain BC13]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGTATCGGACCCGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGTATCGGACCCGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
52.727 |
100 |
0.547 |
| comEA | Vibrio cholerae strain A1552 |
52.727 |
100 |
0.547 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.535 |
95.283 |
0.443 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.959 |
92.453 |
0.443 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |