Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NRK98_RS01090 | Genome accession | NZ_CP102325 |
| Coordinates | 206056..206376 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain BC03 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 201056..211376
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRK98_RS01070 (NRK98_01070) | - | 201359..202036 (-) | 678 | WP_017785925.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| NRK98_RS01075 (NRK98_01075) | - | 202391..203362 (+) | 972 | WP_005309570.1 | response regulator | - |
| NRK98_RS01080 (NRK98_01080) | - | 203438..204835 (-) | 1398 | WP_005309573.1 | peptide MFS transporter | - |
| NRK98_RS01085 (NRK98_01085) | galU | 205049..205960 (-) | 912 | WP_043171881.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NRK98_RS01090 (NRK98_01090) | comEA | 206056..206376 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| NRK98_RS01095 (NRK98_01095) | cysQ | 206543..207313 (+) | 771 | WP_244367095.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NRK98_RS01100 (NRK98_01100) | - | 207392..207688 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| NRK98_RS01105 (NRK98_01105) | - | 207714..208265 (-) | 552 | WP_206866468.1 | septation protein A | - |
| NRK98_RS01110 (NRK98_01110) | - | 208370..209875 (-) | 1506 | WP_252604017.1 | pyridoxal-dependent decarboxylase | - |
| NRK98_RS01115 (NRK98_01115) | trhA | 210093..210728 (+) | 636 | WP_010636289.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=716103 NRK98_RS01090 WP_005309580.1 206056..206376(-) (comEA) [Aeromonas dhakensis strain BC03]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=716103 NRK98_RS01090 WP_005309580.1 206056..206376(-) (comEA) [Aeromonas dhakensis strain BC03]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACTGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACTGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |