Detailed information NTG0714285

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: NQZ84_RS00765
• Genome accession: NZ_CP102094
• Coordinates: 123493..123927 (+)
• Length: 144 a.a.
• NCBI ID: WP_024389483.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 12RC1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 118493..128927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ84_RS00730 (NQZ84_00730)	-	119235..119600 (+)	366	WP_002936568.1	DUF1033 family protein	-
NQZ84_RS00735 (NQZ84_00735)	-	119635..120585 (-)	951	WP_257049510.1	S66 family peptidase	-
NQZ84_RS00740 (NQZ84_00740)	comYA	120671..121621 (+)	951	WP_044769405.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ84_RS00745 (NQZ84_00745)	comYB	121533..122570 (+)	1038	WP_044769407.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ84_RS00750 (NQZ84_00750)	comYC	122572..122853 (+)	282	WP_044683533.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ84_RS00755 (NQZ84_00755)	comGD	122834..123241 (+)	408	WP_044685579.1	competence type IV pilus minor pilin ComGD	-
NQZ84_RS00760 (NQZ84_00760)	comYE	123213..123506 (+)	294	WP_024413203.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ84_RS00765 (NQZ84_00765)	comGF/cglF	123493..123927 (+)	435	WP_024389483.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ84_RS00770 (NQZ84_00770)	comGG	123905..124315 (+)	411	WP_024389482.1	competence type IV pilus minor pilin ComGG	-
NQZ84_RS00775 (NQZ84_00775)	comYH	124372..125325 (+)	954	WP_044753390.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ84_RS00780 (NQZ84_00780)	-	125375..126562 (+)	1188	WP_014637319.1	acetate kinase	-
NQZ84_RS00785 (NQZ84_00785)	-	126877..127428 (+)	552	WP_044752027.1	folate family ECF transporter S component	-
NQZ84_RS00790 (NQZ84_00790)	-	127484..128740 (+)	1257	WP_044752026.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16421.71 Da
• Isoelectric Point: 6.9827

>NTDB_id=714285 NQZ84_RS00765 WP_024389483.1 123493..123927(+) (comGF/cglF) [Streptococcus suis strain 12RC1]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQSELVKVENGKVYVNKDG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=714285 NQZ84_RS00765 WP_024389483.1 123493..123927(+) (comGF/cglF) [Streptococcus suis strain 12RC1]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGTTGGTTCAAGAAGCGCATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAATAAGGATGGA
CAAGCGTTAGCCTTTGGCAAGTCACGTTCGGATGATTTTCGGAAAACAAATGATAGGGGACAGGGTTACCAGCCCATGCT
CTATCAAGTGGATAGCGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	55.319	97.917	0.542
comGF/cglF	Streptococcus pneumoniae Rx1	55.319	97.917	0.542
comGF/cglF	Streptococcus pneumoniae D39	55.319	97.917	0.542
comGF/cglF	Streptococcus pneumoniae R6	55.319	97.917	0.542
comGF/cglF	Streptococcus mitis NCTC 12261	55.97	93.056	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	52.985	93.056	0.493
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458