Detailed information NTG0714283

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: NQZ84_RS00750
• Genome accession: NZ_CP102094
• Coordinates: 122572..122853 (+)
• Length: 93 a.a.
• NCBI ID: WP_044683533.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 12RC1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117572..127853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ84_RS00730 (NQZ84_00730)	-	119235..119600 (+)	366	WP_002936568.1	DUF1033 family protein	-
NQZ84_RS00735 (NQZ84_00735)	-	119635..120585 (-)	951	WP_257049510.1	S66 family peptidase	-
NQZ84_RS00740 (NQZ84_00740)	comYA	120671..121621 (+)	951	WP_044769405.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ84_RS00745 (NQZ84_00745)	comYB	121533..122570 (+)	1038	WP_044769407.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ84_RS00750 (NQZ84_00750)	comYC	122572..122853 (+)	282	WP_044683533.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ84_RS00755 (NQZ84_00755)	comGD	122834..123241 (+)	408	WP_044685579.1	competence type IV pilus minor pilin ComGD	-
NQZ84_RS00760 (NQZ84_00760)	comYE	123213..123506 (+)	294	WP_024413203.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ84_RS00765 (NQZ84_00765)	comGF/cglF	123493..123927 (+)	435	WP_024389483.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ84_RS00770 (NQZ84_00770)	comGG	123905..124315 (+)	411	WP_024389482.1	competence type IV pilus minor pilin ComGG	-
NQZ84_RS00775 (NQZ84_00775)	comYH	124372..125325 (+)	954	WP_044753390.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ84_RS00780 (NQZ84_00780)	-	125375..126562 (+)	1188	WP_014637319.1	acetate kinase	-
NQZ84_RS00785 (NQZ84_00785)	-	126877..127428 (+)	552	WP_044752027.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 93 a.a.
• Molecular weight: 10393.33 Da
• Isoelectric Point: 5.8717

>NTDB_id=714283 NQZ84_RS00750 WP_044683533.1 122572..122853(+) (comYC) [Streptococcus suis strain 12RC1]
MKKLIEMKVKGFTLVEMLVVLGIISLLLLLFVPNLSQQKDAIQKKGDAAVVKVVESQMELYELEHDEEATVADLQAKGYI
TEKQAAEYAKAKK

Nucleotide

• Length: 282 bp

>NTDB_id=714283 NQZ84_RS00750 WP_044683533.1 122572..122853(+) (comYC) [Streptococcus suis strain 12RC1]
ATGAAAAAGTTAATTGAAATGAAGGTAAAAGGGTTCACTCTGGTGGAAATGTTAGTCGTTTTGGGCATTATTAGTCTGCT
CTTGCTCCTCTTTGTGCCAAATTTGAGCCAGCAGAAGGATGCTATTCAGAAGAAGGGGGATGCGGCTGTTGTCAAAGTAG
TGGAGAGCCAGATGGAGCTCTATGAATTGGAACATGACGAGGAAGCAACGGTGGCAGATTTGCAGGCGAAAGGCTATATT
ACTGAAAAACAAGCGGCAGAGTATGCTAAGGCGAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	95.699	100	0.957
comGC/cglC	Streptococcus pneumoniae TIGR4	64.13	98.925	0.634
comGC/cglC	Streptococcus pneumoniae Rx1	64.13	98.925	0.634
comGC/cglC	Streptococcus pneumoniae D39	64.13	98.925	0.634
comGC/cglC	Streptococcus pneumoniae R6	64.13	98.925	0.634
comGC/cglC	Streptococcus mitis NCTC 12261	64.13	98.925	0.634
comGC/cglC	Streptococcus mitis SK321	64.13	98.925	0.634
comYC	Streptococcus gordonii str. Challis substr. CH1	61.798	95.699	0.591
comYC	Streptococcus mutans UA140	60.227	94.624	0.57
comYC	Streptococcus mutans UA159	60.227	94.624	0.57
comGC	Lactococcus lactis subsp. cremoris KW2	56.818	94.624	0.538
comGC	Staphylococcus aureus MW2	50	83.871	0.419
comGC	Staphylococcus aureus N315	50	83.871	0.419
comGC	Bacillus subtilis subsp. subtilis str. 168	49.333	80.645	0.398