Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NQZ84_RS00775 | Genome accession | NZ_CP102094 |
| Coordinates | 124372..125325 (+) | Length | 317 a.a. |
| NCBI ID | WP_044753390.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain 12RC1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 119372..130325
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ84_RS00735 (NQZ84_00735) | - | 119635..120585 (-) | 951 | WP_257049510.1 | S66 family peptidase | - |
| NQZ84_RS00740 (NQZ84_00740) | comYA | 120671..121621 (+) | 951 | WP_044769405.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NQZ84_RS00745 (NQZ84_00745) | comYB | 121533..122570 (+) | 1038 | WP_044769407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NQZ84_RS00750 (NQZ84_00750) | comYC | 122572..122853 (+) | 282 | WP_044683533.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NQZ84_RS00755 (NQZ84_00755) | comGD | 122834..123241 (+) | 408 | WP_044685579.1 | competence type IV pilus minor pilin ComGD | - |
| NQZ84_RS00760 (NQZ84_00760) | comYE | 123213..123506 (+) | 294 | WP_024413203.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NQZ84_RS00765 (NQZ84_00765) | comGF/cglF | 123493..123927 (+) | 435 | WP_024389483.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NQZ84_RS00770 (NQZ84_00770) | comGG | 123905..124315 (+) | 411 | WP_024389482.1 | competence type IV pilus minor pilin ComGG | - |
| NQZ84_RS00775 (NQZ84_00775) | comYH | 124372..125325 (+) | 954 | WP_044753390.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NQZ84_RS00780 (NQZ84_00780) | - | 125375..126562 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| NQZ84_RS00785 (NQZ84_00785) | - | 126877..127428 (+) | 552 | WP_044752027.1 | folate family ECF transporter S component | - |
| NQZ84_RS00790 (NQZ84_00790) | - | 127484..128740 (+) | 1257 | WP_044752026.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| NQZ84_RS00795 (NQZ84_00795) | pepA | 128785..129846 (-) | 1062 | WP_257049523.1 | glutamyl aminopeptidase | - |
| NQZ84_RS00800 (NQZ84_00800) | - | 129993..130277 (+) | 285 | WP_044669887.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35730.90 Da Isoelectric Point: 4.5177
>NTDB_id=714286 NQZ84_RS00775 WP_044753390.1 124372..125325(+) (comYH) [Streptococcus suis strain 12RC1]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLIINNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLIINNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=714286 NQZ84_RS00775 WP_044753390.1 124372..125325(+) (comYH) [Streptococcus suis strain 12RC1]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACGGACCTTATTATCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCGCAGACTATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTAGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCTGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGGTCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACGGACCTTATTATCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCGCAGACTATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTAGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCTGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGGTCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.076 |
99.685 |
0.609 |
| comYH | Streptococcus mutans UA159 |
60.759 |
99.685 |
0.606 |