Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NP805_RS19075 | Genome accession | NZ_CP101948 |
| Coordinates | 4117115..4117435 (+) | Length | 106 a.a. |
| NCBI ID | WP_021140625.1 | Uniprot ID | T0QN50 |
| Organism | Aeromonas salmonicida strain FN1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4112115..4122435
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP805_RS19050 (NP805_19045) | - | 4112741..4113376 (-) | 636 | WP_021140622.1 | hemolysin III family protein | - |
| NP805_RS19055 (NP805_19050) | - | 4113601..4115136 (+) | 1536 | WP_256685412.1 | pyridoxal-dependent decarboxylase | - |
| NP805_RS19060 (NP805_19055) | - | 4115222..4115773 (+) | 552 | WP_005318063.1 | septation protein A | - |
| NP805_RS19065 (NP805_19060) | - | 4115800..4116096 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| NP805_RS19070 (NP805_19065) | cysQ | 4116178..4116948 (-) | 771 | WP_256685415.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NP805_RS19075 (NP805_19070) | comEA | 4117115..4117435 (+) | 321 | WP_021140625.1 | ComEA family DNA-binding protein | Machinery gene |
| NP805_RS19080 (NP805_19075) | galU | 4117530..4118441 (+) | 912 | WP_021140626.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NP805_RS19085 (NP805_19080) | - | 4118655..4120052 (+) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| NP805_RS19090 (NP805_19085) | - | 4120128..4121099 (-) | 972 | WP_256685418.1 | response regulator | - |
| NP805_RS19095 (NP805_19090) | - | 4121195..4121659 (-) | 465 | WP_197665895.1 | response regulator | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11211.08 Da Isoelectric Point: 9.6863
>NTDB_id=713461 NP805_RS19075 WP_021140625.1 4117115..4117435(+) (comEA) [Aeromonas salmonicida strain FN1]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=713461 NP805_RS19075 WP_021140625.1 4117115..4117435(+) (comEA) [Aeromonas salmonicida strain FN1]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAAGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAAGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |