Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | K6J62_RS03680 | Genome accession | NZ_AP018779 |
| Coordinates | 726064..726513 (+) | Length | 149 a.a. |
| NCBI ID | WP_110432056.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain CHBN-III-8 isolate 10H15 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 721064..731513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J62_RS03660 (CHBNIII8_06950) | rsmE | 721526..722263 (-) | 738 | WP_110432052.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| K6J62_RS03665 (CHBNIII8_06960) | lnt | 722313..723842 (-) | 1530 | WP_110432053.1 | apolipoprotein N-acyltransferase | - |
| K6J62_RS03670 (CHBNIII8_06970) | corC | 723865..724764 (-) | 900 | WP_110432054.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| K6J62_RS03675 (CHBNIII8_06980) | ampD | 725396..725950 (-) | 555 | WP_110432055.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| K6J62_RS03680 (CHBNIII8_06990) | pilA | 726064..726513 (+) | 450 | WP_110432056.1 | prepilin peptidase-dependent pilin | Machinery gene |
| K6J62_RS03685 (CHBNIII8_07000) | pilB | 726510..727904 (+) | 1395 | WP_110432057.1 | GspE/PulE family protein | Machinery gene |
| K6J62_RS03690 (CHBNIII8_07010) | pilC | 727901..729121 (+) | 1221 | WP_110432058.1 | type II secretion system F family protein | Machinery gene |
| K6J62_RS03695 (CHBNIII8_07020) | pilD | 729118..729810 (+) | 693 | WP_110432059.1 | A24 family peptidase | Machinery gene |
| K6J62_RS03700 (CHBNIII8_07030) | rho | 729864..731126 (-) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15447.72 Da Isoelectric Point: 8.4623
>NTDB_id=71251 K6J62_RS03680 WP_110432056.1 726064..726513(+) (pilA) [Haemophilus influenzae strain CHBN-III-8 isolate 10H15]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDRMSYTLTAEGDSAKGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDRMSYTLTAEGDSAKGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=71251 K6J62_RS03680 WP_110432056.1 726064..726513(+) (pilA) [Haemophilus influenzae strain CHBN-III-8 isolate 10H15]
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACGGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCTGGTAATGGTAC
ATTAGATAGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CAGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACGGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCTGGTAATGGTAC
ATTAGATAGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CAGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
87.919 |
100 |
0.879 |
| pilA | Haemophilus influenzae Rd KW20 |
83.221 |
100 |
0.832 |
| pilA | Glaesserella parasuis strain SC1401 |
58.389 |
100 |
0.584 |
| pilA2 | Legionella pneumophila str. Paris |
41.216 |
99.329 |
0.409 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.216 |
99.329 |
0.409 |