Detailed information NTG0070575

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: FGCSD_RS02655
• Genome accession: NZ_AP018726
• Coordinates: 502795..503385 (+)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus dysgalactiae strain Kdys0611
• Function: degradation of ComX (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	503903..504931	502795..503385	flank	518

Gene organization within MGE regions

Location: 502795..504931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGCSD_RS02655 (FGCSD_0461)	clpP	502795..503385 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FGCSD_RS02665 (FGCSD_0463)	-	503903..504925 (-)	1023	WP_129555386.1	IS30 family transposase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=70575 FGCSD_RS02655 WP_002985850.1 502795..503385(+) (clpP) [Streptococcus dysgalactiae strain Kdys0611]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=70575 FGCSD_RS02655 WP_002985850.1 502795..503385(+) (clpP) [Streptococcus dysgalactiae strain Kdys0611]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGACATTTACTCACGCTTATTAAAAGACCGTAT
TATCATGTTGACAGGCCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACTATTGTTATGGGGATGGCAGCTTCTATGGGGACTGTCATTGCTTCATCAGGTACTAA
GGGCAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGCGGCGGTACACAACAAA
CAGATATGGCTATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCACAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAGATCATGGAAAATAACGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561