Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SA27298_RS09605 Genome accession   NZ_AP018548
Coordinates   1953291..1954481 (+) Length   396 a.a.
NCBI ID   WP_003032033.1    Uniprot ID   I0S836
Organism   Streptococcus anginosus strain CCUG 27928     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1948291..1959481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS09580 (SA27298_1949) comE 1950098..1950847 (-) 750 WP_018543656.1 competence system response regulator transcription factor ComE Regulator
  SA27298_RS09585 (SA27298_1950) comD/comD2 1950847..1952172 (-) 1326 WP_211209167.1 GHKL domain-containing protein Regulator
  SA27298_RS09590 (SA27298_1951) - 1952190..1952336 (-) 147 WP_003029519.1 bacteriocin -
  SA27298_RS09600 (SA27298_1953) rlmH 1952618..1953097 (-) 480 WP_003032032.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SA27298_RS09605 (SA27298_1954) htrA 1953291..1954481 (+) 1191 WP_003032033.1 trypsin-like peptidase domain-containing protein Regulator
  SA27298_RS09610 (SA27298_1955) spo0J 1954536..1955303 (+) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41651.61 Da        Isoelectric Point: 9.4264

>NTDB_id=70014 SA27298_RS09605 WP_003032033.1 1953291..1954481(+) (htrA) [Streptococcus anginosus strain CCUG 27928]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTNSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLEANGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRDGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=70014 SA27298_RS09605 WP_003032033.1 1953291..1954481(+) (htrA) [Streptococcus anginosus strain CCUG 27928]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCTATAGGTTTTATCGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAAATAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTGAAAGATGCTGTGGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAACAGCGTGTTTGGAAATGATGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGGGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACTCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGAATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGTAAATTGACGGTTGGTGAGACAGCTATTGCGATTGGAAG
TCCGCTCGGATCAAATTACGCTAACACTGTGACGCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTTTAAAATCTG
AAGACGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATTAACCCAGGGAACTCTGGTGGACCACTTGTG
AATATCCAAGGACAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAGTTAGAAGCAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTACGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCCGCTTTATACAAACATTCAATTGGTGACAACATAAAAATCACTTTCTATC
GTGATGGAAAAGAAACTACTACTACCATTAAGCTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0S836

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.561

100

0.765

  htrA Streptococcus mitis NCTC 12261

72.544

100

0.727

  htrA Streptococcus pneumoniae Rx1

72.292

100

0.725

  htrA Streptococcus pneumoniae D39

72.292

100

0.725

  htrA Streptococcus pneumoniae R6

72.292

100

0.725

  htrA Streptococcus pneumoniae TIGR4

72.292

100

0.725

  htrA Streptococcus mutans UA159

55.471

99.242

0.551


Multiple sequence alignment