Detailed information NTG0069808

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LLCC_RS09025
• Genome accession: NZ_AP018499
• Coordinates: 1728378..1729226 (+)
• Length: 282 a.a.
• NCBI ID: WP_061777906.1
• Uniprot ID: A0AAD1NHF5
• Organism: Lactococcus cremoris strain C4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1723378..1734226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLCC_RS09000 (LLCC_1909)	ilvN	1724112..1724588 (+)	477	WP_021037263.1	acetolactate synthase small subunit	-
LLCC_RS09005 (LLCC_1910)	ilvC	1724634..1725656 (+)	1023	WP_061777903.1	ketol-acid reductoisomerase	-
LLCC_RS09010 (LLCC_1911)	ilvA	1725715..1726965 (+)	1251	WP_061777904.1	threonine ammonia-lyase IlvA	-
LLCC_RS09015 (LLCC_1912)	budA	1727100..1727810 (+)	711	WP_011676302.1	acetolactate decarboxylase	-
LLCC_RS09020 (LLCC_1913)	-	1727850..1728230 (+)	381	WP_061777905.1	RidA family protein	-
LLCC_RS09025 (LLCC_1914)	dprA	1728378..1729226 (+)	849	WP_061777906.1	DNA-processing protein DprA	Machinery gene
LLCC_RS09030 (LLCC_1915)	topA	1729492..1731618 (+)	2127	WP_015082465.1	type I DNA topoisomerase	-
LLCC_RS09035 (LLCC_1916)	trmFO	1731690..1733036 (+)	1347	WP_032950090.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LLCC_RS09040 (LLCC_1917)	xerS	1733086..1734156 (-)	1071	WP_014572599.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31827.94 Da
• Isoelectric Point: 9.8386

>NTDB_id=69808 LLCC_RS09025 WP_061777906.1 1728378..1729226(+) (dprA) [Lactococcus cremoris strain C4]
MITNFDLFRWKKAGMTNLGVNKLLKFFRKYDIKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIITELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENSKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=69808 LLCC_RS09025 WP_061777906.1 1728378..1729226(+) (dprA) [Lactococcus cremoris strain C4]
ATGATTACAAATTTTGATTTATTTCGTTGGAAAAAAGCAGGAATGACCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCGCAAATATGATATAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTACAACCCACCCGTTTTAATTTTTTATCAGGGAAATATTGATTTATTAAAAAATCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAGGGATAAAAGCTGTCCAAAAAATTATCACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGGCTTGCTAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATAGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTTCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGCAAAATTAAGAAGTGGCAGTTTAATCACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTCTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.872	100	0.979
dprA	Streptococcus mutans UA159	58.993	98.582	0.582
dprA/cilB/dalA	Streptococcus mitis SK321	56.071	99.291	0.557
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.714	99.291	0.553
dprA	Bacillus subtilis subsp. subtilis str. 168	39.273	97.518	0.383
dprA	Legionella pneumophila strain ERS1305867	39.13	97.872	0.383
dprA	Vibrio campbellii strain DS40M4	35.314	100	0.379
dprA	Haemophilus influenzae Rd KW20	39.63	95.745	0.379