Detailed information NTG0069445

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SR187_RS03065
• Genome accession: NZ_AP018400
• Coordinates: 619604..620215 (+)
• Length: 203 a.a.
• NCBI ID: WP_227984907.1
• Uniprot ID: -
• Organism: Streptococcus ruminantium strain GUT-187
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 614604..625215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SR187_RS03050 (SR187_3110)	-	615537..616763 (+)	1227	WP_120171473.1	MalY/PatB family protein	-
SR187_RS03055 (SR187_3115)	-	617044..618660 (+)	1617	WP_120171474.1	alpha-glucosidase	-
SR187_RS03060 (SR187_3120)	upp	618740..619369 (+)	630	WP_024533020.1	uracil phosphoribosyltransferase	-
SR187_RS03065 (SR187_3125)	clpP	619604..620215 (+)	612	WP_227984907.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SR187_RS03070 (SR187_3130)	-	620353..620622 (+)	270	WP_024533022.1	YlbG family protein	-
SR187_RS03075 (SR187_3135)	-	620765..621937 (+)	1173	WP_120171475.1	ABC transporter substrate-binding protein	-
SR187_RS03080 (SR187_3140)	-	622205..623092 (+)	888	WP_024533024.1	branched-chain amino acid ABC transporter permease	-
SR187_RS03085 (SR187_3145)	-	623095..624042 (+)	948	WP_024533025.1	branched-chain amino acid ABC transporter permease	-
SR187_RS03090 (SR187_3150)	-	624042..624806 (+)	765	WP_024533026.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22310.68 Da
• Isoelectric Point: 6.8832

>NTDB_id=69445 SR187_RS03065 WP_227984907.1 619604..620215(+) (clpP) [Streptococcus ruminantium strain GUT-187]
MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDHAKVK

Nucleotide

• Length: 612 bp

>NTDB_id=69445 SR187_RS03065 WP_227984907.1 619604..620215(+) (clpP) [Streptococcus ruminantium strain GUT-187]
ATCTCGAAAAGGAGTAATTTTATGATTCCAGTAGTTATTGAACAAACCAGTCGAGGTGAGCGTTCGTATGATATTTATTC
TCGCTTGCTGAAAGACCGAATTATCATGTTGACAGGACCAGTTGAAGACAATATGGCAAACTCAGTCATTGCTCAGTTGC
TTTTCCTCGATGCTCAAGACCCTACAAAGGATATTTATTTGTATGTGAACACCCCAGGTGGATCTGTGTCAGCAGGACTT
GCTATTGTAGACACGATGAATTTTATCAAGGCAGATGTCCAAACAATTGTGATGGGAACTGCTGCAAGTATGGGAACTGT
TATCGCATCAAGTGGTGCTAAGGGTAAGCGTTTTATGCTTCCAAATGCAGAGTATATGATTCACCAGCCAATGGGAGGTA
CTGGTGGCGGTACTCAGCAGACAGATATGGCTATTGCTGCAGAACATTTGCTGAAAACACGCAATAAATTAGAAAAAATC
TTAGCTGATAATTCGGGTAAAACAGTGAAGCAAATCCACAAGGATGCAGAACGTGATTATTGGATGTCAGCAGAAGAAAC
CTTGGCCTATGGCTTTATTGACCAAATTATGGATCATGCAAAGGTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.857	96.552	0.897
clpP	Streptococcus pyogenes MGAS315	92.857	96.552	0.897
clpP	Streptococcus pneumoniae R6	92.105	93.596	0.862
clpP	Streptococcus pneumoniae Rx1	92.105	93.596	0.862
clpP	Streptococcus pneumoniae D39	92.105	93.596	0.862
clpP	Streptococcus pneumoniae TIGR4	92.105	93.596	0.862
clpP	Streptococcus mutans UA159	88.776	96.552	0.857
clpP	Streptococcus thermophilus LMG 18311	87.245	96.552	0.842
clpP	Streptococcus thermophilus LMD-9	87.245	96.552	0.842
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	82.234	97.044	0.798
clpP	Lactococcus lactis subsp. cremoris KW2	81.726	97.044	0.793
clpP	Bacillus subtilis subsp. subtilis str. 168	57.653	96.552	0.557
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	95.074	0.552