Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   M9H69_RS06350 Genome accession   NZ_CP097843
Coordinates   1230625..1231275 (-) Length   216 a.a.
NCBI ID   WP_250315113.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1225625..1236275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS06325 (M9H69_06325) - 1226568..1226948 (-) 381 WP_000157148.1 VOC family protein -
  M9H69_RS06330 (M9H69_06330) rplT 1227007..1227366 (-) 360 WP_000124834.1 50S ribosomal protein L20 -
  M9H69_RS06335 (M9H69_06335) rpmI 1227418..1227618 (-) 201 WP_001125942.1 50S ribosomal protein L35 -
  M9H69_RS06340 (M9H69_06340) infC 1227651..1228181 (-) 531 WP_000848184.1 translation initiation factor IF-3 -
  M9H69_RS06345 (M9H69_06345) comEC/celB 1228401..1230641 (-) 2241 WP_250315111.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  M9H69_RS06350 (M9H69_06350) comEA/celA/cilE 1230625..1231275 (-) 651 WP_250315113.1 helix-hairpin-helix domain-containing protein Machinery gene
  M9H69_RS06355 (M9H69_06355) - 1231342..1231911 (-) 570 WP_084875437.1 GNAT family N-acetyltransferase -
  M9H69_RS06360 (M9H69_06360) ald 1232088..1233200 (+) 1113 WP_250315115.1 alanine dehydrogenase -
  M9H69_RS06365 (M9H69_06365) - 1233258..1234244 (-) 987 WP_250315116.1 PhoH family protein -
  M9H69_RS06370 (M9H69_06370) - 1234325..1234540 (-) 216 WP_009066924.1 YozE family protein -
  M9H69_RS06375 (M9H69_06375) - 1234564..1235142 (-) 579 WP_250315118.1 GrpB family protein -
  M9H69_RS06380 (M9H69_06380) cvfB 1235154..1236008 (-) 855 WP_250315119.1 RNA-binding virulence regulatory protein CvfB -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23093.28 Da        Isoelectric Point: 5.9284

>NTDB_id=692934 M9H69_RS06350 WP_250315113.1 1230625..1231275(-) (comEA/celA/cilE) [Streptococcus oralis strain HP01]
MEAIIEKIKEYKIIVICAGLGLALGGFLLLKPSSQTPAKETNLQVEVAAVSKDSSSEKEVKKEEKEESPEQDLITVDVKG
AVKSSGIYDLPVGSRVHDAVQKAGGLTEEADSKSLNLAQKVSDEALVYVPTKGEEVASQQAASGTTPSSSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=692934 M9H69_RS06350 WP_250315113.1 1230625..1231275(-) (comEA/celA/cilE) [Streptococcus oralis strain HP01]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATTGTCATTTGTGCTGGTTTAGGTTTGGCTTTGGGCGGATT
TCTCCTGCTAAAGCCAAGCTCCCAAACTCCCGCAAAGGAGACTAATCTACAGGTTGAAGTTGCCGCTGTTTCAAAGGATT
CATCTTCTGAAAAAGAAGTAAAGAAGGAAGAAAAGGAAGAGTCTCCTGAACAAGATTTGATTACAGTAGATGTCAAAGGT
GCTGTTAAATCTTCAGGAATTTATGATTTGCCAGTAGGTAGTCGTGTTCATGATGCCGTTCAGAAGGCGGGTGGCTTGAC
AGAAGAAGCAGACAGTAAGTCGCTCAATCTCGCTCAGAAAGTCAGTGACGAGGCTCTTGTCTATGTTCCAACTAAGGGAG
AAGAAGTAGCTAGTCAGCAGGCTGCCTCTGGAACGACTCCTTCGTCAAGTAAAGAAAAGAAGGTCAACCTCAATAAAGCT
AGTCTGGAAGAACTCAAGCAGGTCAAAGGCTTGGGAGGAAAACGAGCTCAGGATATTATCGACCATCGCGAGGCAAATGG
GAAATTCAAGTCGGTAGATGAATTAAAGAAAGTATCTGGCATTGGCGCTAAGACCATAGAAAAGCTAAAAGATTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

90.278

100

0.903

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

89.815

100

0.898

  comEA/celA/cilE Streptococcus pneumoniae R6

88.426

100

0.884

  comEA/celA/cilE Streptococcus pneumoniae D39

88.426

100

0.884

  comEA/celA/cilE Streptococcus pneumoniae Rx1

88.426

100

0.884

  comEA/celA/cilE Streptococcus mitis SK321

86.111

100

0.861

  comEA Lactococcus lactis subsp. cremoris KW2

41.441

100

0.426