Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   M9H69_RS06345 Genome accession   NZ_CP097843
Coordinates   1228401..1230641 (-) Length   746 a.a.
NCBI ID   WP_250315111.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1223401..1235641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS06315 (M9H69_06315) - 1224571..1225557 (-) 987 WP_250315109.1 dihydroorotate dehydrogenase -
  M9H69_RS06320 (M9H69_06320) - 1225520..1226320 (-) 801 WP_250315110.1 dihydroorotate dehydrogenase electron transfer subunit -
  M9H69_RS06325 (M9H69_06325) - 1226568..1226948 (-) 381 WP_000157148.1 VOC family protein -
  M9H69_RS06330 (M9H69_06330) rplT 1227007..1227366 (-) 360 WP_000124834.1 50S ribosomal protein L20 -
  M9H69_RS06335 (M9H69_06335) rpmI 1227418..1227618 (-) 201 WP_001125942.1 50S ribosomal protein L35 -
  M9H69_RS06340 (M9H69_06340) infC 1227651..1228181 (-) 531 WP_000848184.1 translation initiation factor IF-3 -
  M9H69_RS06345 (M9H69_06345) comEC/celB 1228401..1230641 (-) 2241 WP_250315111.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  M9H69_RS06350 (M9H69_06350) comEA/celA/cilE 1230625..1231275 (-) 651 WP_250315113.1 helix-hairpin-helix domain-containing protein Machinery gene
  M9H69_RS06355 (M9H69_06355) - 1231342..1231911 (-) 570 WP_084875437.1 GNAT family N-acetyltransferase -
  M9H69_RS06360 (M9H69_06360) ald 1232088..1233200 (+) 1113 WP_250315115.1 alanine dehydrogenase -
  M9H69_RS06365 (M9H69_06365) - 1233258..1234244 (-) 987 WP_250315116.1 PhoH family protein -
  M9H69_RS06370 (M9H69_06370) - 1234325..1234540 (-) 216 WP_009066924.1 YozE family protein -
  M9H69_RS06375 (M9H69_06375) - 1234564..1235142 (-) 579 WP_250315118.1 GrpB family protein -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84646.82 Da        Isoelectric Point: 9.1419

>NTDB_id=692933 M9H69_RS06345 WP_250315111.1 1228401..1230641(-) (comEC/celB) [Streptococcus oralis strain HP01]
MLQWIKNFPIPLIYLSFLLLWLYYAIFGASYLALLGFVFLLVCLFFQFPWKSASRVLAICGLFGFWFLFQTWQQTQASQD
LVAYVEKVRIFPDTIKVNGDSLSFRGKADGRTFQVYYKLQSEEEKEHFQALTDLHEIELEGKLSEPEGQRNFGGFDYQAY
LKTQGIYQTLTIKSIQSLKKVSSWDIGENLSALRRRAVVWIKTHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDAFKKLLLRLGLTQEKLKWLTYPFSLIYAGLTGFSASVIRSLLQKLLAQHGYKGLDNFALTVLALFII
MPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVARESLVISLGILPLLSFYFAEFQPWSILLTLVFSFLFDLVFLPLLSI
LFILSFVYPVTQLNLVFEWLEDIIRLVSQMASRPLVFGQPNAWLLILLLVSLALVYDFRKNIKRVAGFSLFIVGLFFLTK
HPLENEITMLDVGQGESIFLRDVTGKTILIDVGGKAESDKKIEDWQEKSTTSNAQRTLIPYLKSRGVSKIDHLILTNTDK
EHVGDLLEMTKAFHVGETLVSKGSLTQKEFVAELQATQTKVRSVTAGENLPIFGGYLGVLSPRKIGDGSYDDSLLLYGKL
LDKHFLFTGNLKEKGEKELLKQYPTLEVDILKAGQHGSKTSSSPAFLEKLKPQITLISVGKNNSAKLPHQETLERLESIK
SKIYRTDQNGAIRFKGWNSWRMESVR

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=692933 M9H69_RS06345 WP_250315111.1 1228401..1230641(-) (comEC/celB) [Streptococcus oralis strain HP01]
ATGTTACAGTGGATTAAGAATTTCCCTATCCCCCTAATCTATCTGAGTTTTCTGTTACTCTGGCTTTACTACGCCATTTT
TGGAGCGTCCTATCTCGCACTGCTAGGTTTTGTTTTTTTGCTCGTCTGTCTCTTTTTCCAATTTCCTTGGAAATCGGCTA
GTAGAGTTCTAGCGATTTGTGGACTCTTTGGCTTTTGGTTTCTGTTTCAAACTTGGCAACAGACACAAGCTAGTCAAGAC
TTAGTCGCTTATGTTGAAAAGGTGAGGATTTTTCCAGATACTATCAAAGTCAATGGAGATAGCCTGTCCTTTCGGGGCAA
GGCCGACGGACGCACCTTCCAAGTTTACTATAAACTCCAGTCCGAGGAAGAGAAAGAGCACTTTCAGGCCTTAACAGATC
TTCATGAGATTGAACTAGAAGGAAAACTGTCCGAGCCAGAAGGGCAGAGGAATTTTGGTGGATTTGACTACCAAGCCTAT
CTGAAAACTCAAGGGATTTACCAGACACTGACTATCAAGAGCATCCAGTCACTTAAAAAAGTTAGCAGTTGGGATATAGG
TGAAAATTTGTCGGCTTTACGTCGAAGGGCTGTAGTTTGGATCAAGACGCACTTTCCAGACCCTATGCGCAATTATATGA
CGGGGCTCTTGCTGGGACATTTGGACACGGACTTTGAGGAGATGAATGAGCTTTATTCCAGTCTAGGAATTATCCATCTC
TTTGCCTTGTCGGGTATGCAGGTGGGCTTTTTCATGGATGCCTTTAAGAAACTCCTCTTACGATTGGGCTTGACCCAAGA
AAAGTTGAAGTGGCTGACTTATCCCTTTTCTCTTATCTATGCTGGTCTGACAGGATTTTCAGCATCGGTCATTCGCAGTC
TCTTGCAAAAGTTACTGGCCCAACATGGCTACAAGGGCTTGGATAATTTTGCCTTAACAGTCCTTGCCCTCTTTATCATC
ATGCCCAACTTTTTCTTGACAGCTGGAGGGGTTTTGTCCTGTGCCTACGCCTTTATCTTGACCATGACCAGCAAAGAAGG
GGAGGGGCTCAAGGCTGTTGCCAGAGAAAGTCTGGTCATTTCTTTAGGAATATTGCCCCTTTTATCCTTCTATTTTGCAG
AATTTCAACCTTGGTCAATTCTCTTAACCCTTGTCTTTTCCTTTCTGTTTGACTTGGTATTCTTACCACTTTTGTCCATC
TTATTCATCCTGTCTTTTGTTTACCCAGTCACTCAGCTTAACCTTGTCTTTGAATGGTTGGAGGACATCATTCGCTTGGT
ATCGCAGATGGCAAGCAGGCCCTTGGTCTTTGGACAACCCAACGCATGGCTTTTGATTCTACTCTTAGTTTCATTGGCCT
TGGTCTATGACTTTAGGAAAAATATCAAAAGAGTAGCAGGGTTCAGCCTCTTTATAGTGGGACTCTTTTTCTTAACCAAA
CACCCGCTGGAAAATGAAATCACCATGCTGGATGTAGGGCAGGGAGAAAGCATTTTTCTACGGGATGTAACTGGTAAAAC
CATTCTCATAGATGTGGGCGGAAAGGCAGAATCTGATAAGAAAATAGAGGATTGGCAAGAAAAATCGACGACTAGCAATG
CCCAGAGGACCTTGATTCCCTATCTGAAAAGTCGCGGAGTATCCAAAATTGATCACTTAATTCTGACCAACACAGATAAA
GAACATGTTGGAGATTTGCTGGAGATGACCAAGGCTTTCCATGTCGGGGAAACTTTAGTATCAAAGGGAAGTCTGACACA
AAAGGAATTTGTAGCGGAACTACAAGCGACTCAAACCAAGGTGCGCAGTGTGACAGCAGGGGAGAACTTACCAATTTTTG
GCGGTTACTTAGGAGTCCTATCTCCAAGGAAGATTGGAGATGGAAGTTATGATGATTCTCTCCTTCTTTATGGAAAACTC
TTGGATAAGCACTTTCTCTTTACTGGAAATTTGAAGGAGAAGGGAGAGAAAGAACTTTTAAAGCAATACCCTACCTTAGA
GGTGGATATCTTGAAGGCAGGTCAACATGGTTCAAAGACTTCATCTAGTCCAGCTTTTTTAGAGAAGCTCAAACCGCAAA
TTACTCTCATTTCAGTGGGCAAGAACAATAGTGCCAAACTACCTCATCAGGAAACCTTGGAACGACTAGAAAGCATCAAG
AGTAAGATTTACCGAACTGACCAGAACGGAGCCATTCGCTTTAAAGGATGGAATAGTTGGCGAATGGAAAGTGTTCGATA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis NCTC 12261

87.919

99.866

0.878

  comEC/celB Streptococcus mitis SK321

87.534

100

0.875

  comEC/celB Streptococcus pneumoniae TIGR4

86.059

100

0.861

  comEC/celB Streptococcus pneumoniae Rx1

85.657

100

0.857

  comEC/celB Streptococcus pneumoniae D39

85.657

100

0.857

  comEC/celB Streptococcus pneumoniae R6

85.657

100

0.857

  comEC Lactococcus lactis subsp. cremoris KW2

44.265

99.33

0.44