Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   M9H69_RS01655 Genome accession   NZ_CP097843
Coordinates   295499..297475 (+) Length   658 a.a.
NCBI ID   WP_250315738.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 290499..302475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01625 (M9H69_01625) - 290941..291171 (+) 231 WP_084911818.1 DUF1146 family protein -
  M9H69_RS01630 (M9H69_01630) murA 291195..292478 (+) 1284 WP_084874506.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  M9H69_RS01635 (M9H69_01635) - 292465..292659 (+) 195 WP_061415718.1 DNA-directed RNA polymerase subunit beta -
  M9H69_RS01640 (M9H69_01640) endA 292700..293524 (+) 825 WP_250315736.1 DNA/RNA non-specific endonuclease Machinery gene
  M9H69_RS01645 (M9H69_01645) - 293660..294991 (+) 1332 WP_250315737.1 hemolysin family protein -
  M9H69_RS01655 (M9H69_01655) amiA3 295499..297475 (+) 1977 WP_250315738.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS01660 (M9H69_01660) amiC 297542..299038 (+) 1497 WP_221161208.1 ABC transporter permease Regulator
  M9H69_RS01665 (M9H69_01665) amiD 299038..299964 (+) 927 WP_000103693.1 oligopeptide ABC transporter permease OppC Regulator
  M9H69_RS01670 (M9H69_01670) amiE 299973..301040 (+) 1068 WP_000159803.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS01675 (M9H69_01675) amiF 301051..301980 (+) 930 WP_001291313.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72733.86 Da        Isoelectric Point: 4.8289

>NTDB_id=692910 M9H69_RS01655 WP_250315738.1 295499..297475(+) (amiA3) [Streptococcus oralis strain HP01]
MKKSRVLVAAGVALLATGVLAACGSKSSDSTAPKNYGYIYSADPETLDYLISGKQSTKIATSNGIDGLFTNDKYGNLTPA
VAEDWSVSKDGLTYTYKIRKGVKWMTSDGEEYAEVTAKDFVNGLKHAADKKSEALYLAETSVKGLSDYLSGNSKDFSTVG
VKAVDDYTLEYTLNQPEPYWNSKMAYSIFWPLNEDFEKSKGSDFAKATDPTSLLYNGPFLLKGLTTKSSIEFAKNEQYWD
KDNVHLDKVTLAFYDGSDQESIERNFTSGAYSYARLFPTSSNYSKVEETYKDNIFYTPSGPGIAGLGVNIDRQGYKYTSK
TTDEEKTSTKKALLNKDFRQALNFAFDRTSYSAQINGKEGAPLAVRNLFVKPGFVSAGEKTFGDLVTEKMATYGDEWKNV
NFADGQDGLFNADKAKAEFAKAKTALEAEGVKFPIHLDIPVDQTSKNYIARIQSFKQSVETVLGEGNVVIDIQQVSKDEL
NNITYYAASAAAEDWDLSGAVGWNPDYEDPSTYLDILKTTNAEQTKTYMGYEGADNAAAAQVGLKEYDKLVDEAAKETSD
LNVRYEKYAAAQAWLTDSSLFLPAMSSSGAAPFISRVVPFSASYSQSGDKSSDVYFKYIQLQDKVVTKADYEQAREKWLK
EKKESNEKVQKELTNHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=692910 M9H69_RS01655 WP_250315738.1 295499..297475(+) (amiA3) [Streptococcus oralis strain HP01]
ATGAAAAAAAGTAGAGTATTGGTTGCAGCAGGAGTTGCTTTATTAGCAACTGGAGTACTAGCTGCTTGCGGTTCTAAATC
ATCTGATTCAACGGCGCCAAAAAATTATGGTTATATCTATTCAGCTGACCCAGAAACGTTGGATTACCTCATTTCAGGTA
AACAAAGTACTAAGATTGCCACTTCAAATGGTATTGATGGTCTCTTCACAAATGACAAATATGGGAATTTGACTCCCGCA
GTGGCAGAAGATTGGTCAGTCTCAAAAGATGGTTTGACTTATACCTACAAAATCCGTAAAGGTGTTAAATGGATGACATC
TGATGGAGAAGAGTACGCTGAAGTAACAGCTAAAGATTTCGTAAATGGTTTGAAACACGCAGCAGATAAGAAATCCGAAG
CCCTATATTTAGCAGAAACTTCTGTTAAAGGATTGTCTGATTATTTGTCTGGAAATTCAAAAGACTTTTCTACGGTAGGT
GTGAAGGCAGTTGATGATTATACTCTTGAGTATACATTGAACCAACCAGAACCATACTGGAACTCTAAGATGGCTTATTC
AATCTTCTGGCCATTGAACGAAGATTTTGAAAAATCAAAAGGATCAGATTTTGCCAAAGCAACAGATCCTACGTCCTTGC
TTTATAATGGTCCGTTCTTGCTAAAAGGTTTGACTACTAAATCTTCTATCGAATTTGCTAAGAATGAGCAGTACTGGGAT
AAGGATAATGTTCACCTTGATAAAGTTACTCTTGCTTTCTATGATGGGTCAGACCAAGAGTCCATTGAACGTAACTTTAC
AAGTGGAGCATACAGCTATGCTCGCCTTTTCCCAACAAGTTCAAACTACTCTAAGGTAGAAGAAACATACAAAGACAATA
TCTTCTACACTCCATCAGGACCTGGTATTGCTGGTTTGGGTGTGAATATTGACCGTCAAGGTTACAAATACACTTCTAAG
ACAACTGACGAAGAGAAAACTTCTACTAAGAAAGCCCTTCTTAACAAGGATTTCCGTCAGGCCTTGAACTTTGCCTTTGA
CCGTACTTCTTACTCAGCACAAATCAATGGTAAAGAAGGTGCTCCTCTTGCAGTTCGTAACCTCTTTGTGAAACCAGGTT
TTGTCTCTGCAGGTGAAAAAACTTTCGGTGACTTGGTAACTGAAAAGATGGCTACTTATGGTGATGAGTGGAAGAATGTA
AACTTTGCGGATGGTCAAGATGGACTCTTCAACGCCGATAAAGCCAAAGCCGAATTTGCCAAAGCTAAAACTGCATTGGA
AGCAGAAGGTGTGAAATTCCCTATCCACTTGGATATTCCAGTAGACCAAACATCTAAAAACTATATCGCACGTATCCAAT
CTTTCAAACAATCCGTTGAAACAGTACTTGGTGAAGGCAATGTAGTCATTGATATCCAACAAGTTTCTAAAGATGAGTTG
AACAATATCACTTACTATGCTGCAAGCGCTGCGGCAGAAGATTGGGATCTCTCAGGAGCAGTTGGGTGGAACCCAGACTA
TGAAGATCCGTCAACTTACCTTGATATCTTGAAAACAACGAATGCTGAACAAACAAAAACATACATGGGTTACGAAGGTG
CAGATAACGCTGCGGCTGCTCAAGTTGGTTTGAAAGAATACGATAAGCTAGTTGATGAAGCTGCTAAAGAAACAAGCGAT
TTGAATGTTCGTTATGAAAAATACGCGGCTGCCCAAGCTTGGTTGACAGATAGCTCACTCTTCTTGCCAGCTATGTCATC
AAGTGGTGCTGCACCATTCATTTCTCGTGTTGTACCATTCTCAGCATCATACAGCCAGTCTGGAGATAAGAGCTCAGATG
TATACTTCAAGTATATTCAGTTGCAAGACAAGGTTGTAACGAAAGCTGATTACGAACAAGCTCGTGAGAAATGGCTCAAA
GAGAAAAAAGAATCAAACGAAAAAGTTCAAAAAGAATTGACGAATCACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

67.982

100

0.681
  amiA3 Streptococcus thermophilus LMG 18311

67.83

100

0.679
  amiA Streptococcus salivarius strain HSISS4

67.933

100

0.679