Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   M9H69_RS01660 Genome accession   NZ_CP097843
Coordinates   297542..299038 (+) Length   498 a.a.
NCBI ID   WP_221161208.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 292542..304038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01640 (M9H69_01640) endA 292700..293524 (+) 825 WP_250315736.1 DNA/RNA non-specific endonuclease Machinery gene
  M9H69_RS01645 (M9H69_01645) - 293660..294991 (+) 1332 WP_250315737.1 hemolysin family protein -
  M9H69_RS01655 (M9H69_01655) amiA3 295499..297475 (+) 1977 WP_250315738.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS01660 (M9H69_01660) amiC 297542..299038 (+) 1497 WP_221161208.1 ABC transporter permease Regulator
  M9H69_RS01665 (M9H69_01665) amiD 299038..299964 (+) 927 WP_000103693.1 oligopeptide ABC transporter permease OppC Regulator
  M9H69_RS01670 (M9H69_01670) amiE 299973..301040 (+) 1068 WP_000159803.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS01675 (M9H69_01675) amiF 301051..301980 (+) 930 WP_001291313.1 ATP-binding cassette domain-containing protein Regulator
  M9H69_RS01680 (M9H69_01680) - 302069..303508 (-) 1440 WP_001043438.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55676.04 Da        Isoelectric Point: 9.1164

>NTDB_id=692911 M9H69_RS01660 WP_221161208.1 297542..299038(+) (amiC) [Streptococcus oralis strain HP01]
MKKYIFMRVLRSLLSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTPDKRDNYENTVYERMGYIEYYDTKELQEKAS
SMDSSVTVDANDTNKAIYEKYINQLGNGWTLGVFSESGQFYATREIPIFERVFKFYANLLDIDHTNKIQDPENPNLERYL
RFENDPAIGWSLVGSGTKHKYLLYFNNQFPFVHQNFVNINLGDSYPTYANTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
DIYSRTYKSPSQADAREIANYGKDDPYTATESNYQYPSMIASSAVAGLIGLVISYAIAIPLGSAMARHKNTWIDSFSTGA
LTFLLALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPSTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHVFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLFVGD
IWMTMLDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=692911 M9H69_RS01660 WP_221161208.1 297542..299038(+) (amiC) [Streptococcus oralis strain HP01]
ATGAAAAAATATATTTTTATGCGTGTCTTGCGCTCATTGTTGTCTATTTTCTTGGTGACAACCTTGACCTACACGATTAT
CTATACGATGGTTCCTCGGAAACTGATTTTCAAGCAGGATACCAACTACAACAAGATTGCAACGACTCCAGATAAGCGGG
ATAATTATGAGAATACCGTTTATGAACGTATGGGCTATATCGAGTACTACGATACTAAGGAGTTGCAAGAAAAAGCTAGC
TCAATGGACTCATCTGTAACAGTAGATGCCAATGATACCAATAAGGCAATCTACGAAAAATACATCAACCAACTCGGTAA
TGGTTGGACGTTAGGTGTCTTTTCAGAGAGTGGTCAGTTCTATGCTACGCGTGAAATTCCAATTTTTGAACGTGTTTTCA
AATTCTATGCGAACTTACTTGATATTGATCATACAAACAAGATTCAAGACCCTGAAAATCCAAACTTGGAACGTTATCTT
CGTTTTGAAAATGACCCTGCTATCGGTTGGTCATTGGTTGGTTCAGGTACCAAACATAAATACCTTTTGTATTTCAACAA
TCAATTCCCGTTTGTACACCAAAACTTTGTGAACATTAACTTGGGTGACTCCTACCCAACTTATGCGAACACGCCAGTGC
TTCAAGTTATCACACAAGGCCAAGGACAAACCAAGACATCAGAAGTTCAATTCCCTACGGGTAAAAAGACTTCGTCTGTA
GATATTTACTCTCGTACCTACAAATCTCCAAGTCAAGCAGATGCGCGTGAAATAGCTAACTATGGTAAGGACGATCCATA
TACAGCTACAGAAAGTAACTACCAATATCCATCTATGATTGCAAGCTCAGCTGTTGCTGGTTTGATTGGTTTGGTTATTT
CGTATGCTATTGCGATTCCTCTTGGATCTGCTATGGCTCGCCACAAGAATACTTGGATTGATAGCTTCTCAACAGGCGCT
CTAACCTTCTTGCTTGCACTTCCAACGATTGCTTTGGTTTATATCGTTCGCTTGATTGGATCATCTATTGGTCTTCCAGA
CTCATTCCCTATCCTAGGTGCTGGAGATTGGCGTTCCTATGTCTTGCCAGCAGTCATTTTAGGTTTGCTGGGAGCACCAA
GTACAGCAATCTGGATTCGTCGTTATATGATTGATTTGCAATCTCAAGACTTCGTCCGTTTTGCTCGTGCAAAAGGTTTA
TCTGAAAAAGAAATTTCAAATAAACACGTCTTTAAAAATGCCATGGTTCCTTTGGTTTCAGGTATTCCAGGTGCCGTAAT
CGGGGTTATTGGTGGTGCAACATTGACAGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTTA
AGGCATCAAATAACTCAATGGTAGTTGGTCTCGTCTTCATCTTTACATGTATTTCTATCTTCTCACTCTTTGTAGGAGAT
ATCTGGATGACTATGCTTGACCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

77.309

100

0.773
  amiC Streptococcus thermophilus LMG 18311

76.707

100

0.767
  amiC Streptococcus thermophilus LMD-9

76.506

100

0.765