Detailed information NTG0688936

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: M6D84_RS13690
• Genome accession: NZ_CP097351
• Coordinates: 2695605..2696186 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991610.1
• Uniprot ID: A0A9W5QF48
• Organism: Bacillus cereus strain DQ01
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2690605..2701186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M6D84_RS13660 (M6D84_13660)	-	2691228..2691719 (-)	492	WP_025709464.1	HIT family protein	-
M6D84_RS13665 (M6D84_13665)	-	2691820..2691987 (-)	168	WP_000508397.1	hypothetical protein	-
M6D84_RS13670 (M6D84_13670)	-	2692205..2692441 (+)	237	WP_025709465.1	hypothetical protein	-
M6D84_RS13675 (M6D84_13675)	-	2692495..2693331 (-)	837	WP_001084760.1	proline/glycine betaine ABC transporter permease	-
M6D84_RS13680 (M6D84_13680)	-	2693324..2694529 (-)	1206	WP_048558475.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
M6D84_RS13685 (M6D84_13685)	-	2694701..2695558 (+)	858	WP_001227620.1	glycine betaine ABC transporter substrate-binding protein	-
M6D84_RS13690 (M6D84_13690)	clpP	2695605..2696186 (-)	582	WP_000991610.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
M6D84_RS13695 (M6D84_13695)	-	2696208..2696894 (-)	687	WP_030025885.1	RNA polymerase subunit sigma-70	-
M6D84_RS13700 (M6D84_13700)	-	2697037..2697357 (+)	321	WP_001125395.1	2Fe-2S iron-sulfur cluster-binding protein	-
M6D84_RS13705 (M6D84_13705)	rpiA	2697362..2698024 (+)	663	WP_025709469.1	ribose 5-phosphate isomerase A	-
M6D84_RS13710 (M6D84_13710)	-	2698139..2698573 (+)	435	WP_001190865.1	GNAT family N-acetyltransferase	-
M6D84_RS13715 (M6D84_13715)	-	2698699..2700066 (-)	1368	WP_001065145.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21192.45 Da
• Isoelectric Point: 5.0776

>NTDB_id=688936 M6D84_RS13690 WP_000991610.1 2695605..2696186(-) (clpP) [Bacillus cereus strain DQ01]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=688936 M6D84_RS13690 WP_000991610.1 2695605..2696186(-) (clpP) [Bacillus cereus strain DQ01]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	97.927	0.513
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492