Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M0M92_RS08190 Genome accession   NZ_CP096263
Coordinates   1762149..1762745 (+) Length   198 a.a.
NCBI ID   WP_023289053.1    Uniprot ID   A0A2N4W2M8
Organism   Klebsiella quasipneumoniae strain KP20-558     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1757149..1767745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0M92_RS08165 (M0M92_08165) - 1757326..1759083 (-) 1758 WP_032455286.1 Lon protease family protein -
  M0M92_RS08170 (M0M92_08170) matP 1759269..1759721 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  M0M92_RS08175 (M0M92_08175) ompA 1759868..1760938 (-) 1071 WP_023289051.1 porin OmpA -
  M0M92_RS08180 (M0M92_08180) sulA 1761291..1761800 (-) 510 WP_023289052.1 SOS-induced cell division inhibitor SulA -
  M0M92_RS08185 (M0M92_08185) - 1761826..1762131 (+) 306 WP_158238131.1 hypothetical protein -
  M0M92_RS08190 (M0M92_08190) sxy/tfoX 1762149..1762745 (+) 597 WP_023289053.1 TfoX/Sxy family DNA transformation protein Regulator
  M0M92_RS08195 (M0M92_08195) yccS 1762756..1764891 (-) 2136 WP_117264707.1 YccS family putative transporter -
  M0M92_RS08200 (M0M92_08200) - 1764909..1765355 (-) 447 Protein_1581 YccF domain-containing protein -
  M0M92_RS08205 (M0M92_08205) helD 1765480..1767534 (+) 2055 WP_248569293.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22670.34 Da        Isoelectric Point: 10.2333

>NTDB_id=680747 M0M92_RS08190 WP_023289053.1 1762149..1762745(+) (sxy/tfoX) [Klebsiella quasipneumoniae strain KP20-558]
MRKLVCPRLPQFQACVSPLGQLHSRPLFGGYSLAIEDTVFAMVAEGNIYLKACEQSAAYRVEHHNPLLMLRRHGRIVPLK
YYQIDDALWRDEKQLFRLSLMSWQSAQREKYRRRSSGRLKDLPNISFHMELQLIHSGIPDVLALREVGARQAWLKLRENN
ASLSHNVLLALEGAIVGVHAAALPTPRRQELLEWASAR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=680747 M0M92_RS08190 WP_023289053.1 1762149..1762745(+) (sxy/tfoX) [Klebsiella quasipneumoniae strain KP20-558]
ATGAGAAAACTCGTATGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCTCCGCTGGGTCAACTTCACTCTCGCCCCCT
GTTTGGCGGCTACAGCCTGGCTATCGAAGATACCGTGTTTGCGATGGTGGCAGAGGGGAATATTTATCTAAAGGCCTGCG
AGCAGAGCGCTGCCTATCGGGTAGAACACCATAATCCTTTATTGATGCTGCGCCGACACGGGCGCATCGTGCCGCTAAAG
TATTATCAAATCGACGATGCCTTGTGGCGCGATGAGAAACAGCTTTTCCGCTTGTCACTGATGTCGTGGCAGAGCGCCCA
GCGTGAAAAATATCGCCGCCGGTCGTCGGGACGCCTGAAGGATTTACCCAATATCAGTTTTCATATGGAATTGCAGCTGA
TTCACTCGGGCATACCAGACGTGTTAGCACTACGGGAGGTGGGCGCCCGCCAGGCCTGGCTAAAGCTGCGCGAGAACAAT
GCTTCCCTATCGCACAACGTCTTGCTGGCGCTGGAGGGGGCTATCGTTGGCGTTCATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTGGAATGGGCGTCTGCGCGCTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(16-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N4W2M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

49.746

99.495

0.495