Detailed information NTG0673695

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHB14_RS10200
• Genome accession: NZ_CP109303
• Coordinates: 2202555..2203190 (+)
• Length: 211 a.a.
• NCBI ID: WP_406438891.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01613
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2197555..2208190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB14_RS10170 (OHB14_10150)	ureG	2197875..2198558 (-)	684	WP_405875156.1	urease accessory protein UreG	-
OHB14_RS10175 (OHB14_10155)	-	2198795..2199469 (-)	675	WP_405877738.1	urease accessory protein UreF	-
OHB14_RS10180 (OHB14_10160)	-	2199523..2201244 (-)	1722	WP_405875155.1	urease subunit alpha	-
OHB14_RS10185 (OHB14_10165)	-	2201237..2201548 (-)	312	WP_405875154.1	urease subunit beta	-
OHB14_RS10190 (OHB14_10170)	-	2201559..2201861 (-)	303	WP_405875153.1	urease subunit gamma	-
OHB14_RS10195 (OHB14_10175)	-	2202213..2202491 (-)	279	WP_405875152.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
OHB14_RS10200 (OHB14_10180)	clpP	2202555..2203190 (+)	636	WP_406438891.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB14_RS10205 (OHB14_10185)	-	2203198..2203506 (+)	309	WP_405875150.1	hypothetical protein	-
OHB14_RS10210 (OHB14_10190)	-	2204059..2204532 (+)	474	WP_405875149.1	C40 family peptidase	-
OHB14_RS10215 (OHB14_10195)	-	2204644..2205102 (-)	459	WP_405875148.1	ATP-binding protein	-
OHB14_RS10220 (OHB14_10200)	-	2205316..2206176 (+)	861	WP_405875147.1	helix-turn-helix domain-containing protein	-
OHB14_RS10225 (OHB14_10205)	-	2206186..2206413 (+)	228	WP_405875146.1	DUF397 domain-containing protein	-
OHB14_RS10230 (OHB14_10210)	-	2206455..2207582 (-)	1128	WP_406438894.1	8-amino-7-oxononanoate synthase	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 23105.15 Da
• Isoelectric Point: 4.7796

>NTDB_id=673695 OHB14_RS10200 WP_406438891.1 2202555..2203190(+) (clpP) [Streptomyces sp. NBC_01613]
MTRPSARYVLPEFTERTSFGSRTMDPYSKLLEERIVFLGTQIDDTSANDVMAQFMHLEYQDPDRDISLYINSPGGSFTAM
SALYDTLQFVSCDVETICLGQAGSSAAVLLGAGTPGKRFALPGARVVIHQPALAEPVQGQASDLAIQAEELSRMRTRLEE
MLVRHTGRSPEQVSADIERDKILDAQGAVDYGLVDRIIPSRRATLAPPTGR

Nucleotide

• Length: 636 bp

>NTDB_id=673695 OHB14_RS10200 WP_406438891.1 2202555..2203190(+) (clpP) [Streptomyces sp. NBC_01613]
ATGACCCGACCGTCCGCCCGCTACGTCCTGCCCGAGTTCACCGAACGCACGAGCTTCGGCAGTAGGACGATGGATCCGTA
CTCGAAGCTGCTGGAGGAGCGGATCGTCTTCCTCGGGACGCAGATCGACGACACCTCGGCGAACGACGTGATGGCGCAGT
TCATGCACCTCGAGTACCAGGACCCCGACCGGGACATCTCGCTCTACATCAACTCCCCCGGCGGCTCGTTCACCGCCATG
TCGGCGCTCTACGACACCTTGCAGTTCGTCAGCTGCGACGTGGAGACGATCTGCCTGGGCCAGGCCGGTTCGTCCGCCGC
GGTGCTGCTGGGGGCGGGCACGCCGGGCAAGCGGTTCGCGCTGCCGGGCGCGCGCGTGGTGATCCATCAGCCGGCGCTGG
CCGAGCCGGTGCAGGGGCAGGCGAGCGATCTGGCCATCCAGGCCGAGGAGTTGAGCCGGATGCGGACCCGGCTCGAGGAG
ATGCTCGTACGGCACACGGGGCGCAGCCCGGAGCAGGTGAGCGCGGACATCGAGCGGGACAAGATCCTGGACGCCCAAGG
AGCGGTCGACTACGGGCTGGTGGACCGGATCATCCCCAGCCGCAGGGCCACCCTCGCCCCGCCCACCGGGCGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (21-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	45.789	90.047	0.412
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	44.974	89.573	0.403
clpP	Streptococcus pneumoniae R6	43.005	91.469	0.393
clpP	Streptococcus pneumoniae Rx1	43.005	91.469	0.393
clpP	Streptococcus pneumoniae D39	43.005	91.469	0.393
clpP	Streptococcus pneumoniae TIGR4	43.005	91.469	0.393
clpP	Lactococcus lactis subsp. cremoris KW2	42.268	91.943	0.389
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	42.268	91.943	0.389
clpP	Streptococcus thermophilus LMG 18311	41.753	91.943	0.384
clpP	Streptococcus thermophilus LMD-9	41.753	91.943	0.384
clpP	Streptococcus pyogenes MGAS315	41.969	91.469	0.384
clpP	Streptococcus pyogenes JRS4	41.969	91.469	0.384
clpP	Streptococcus mutans UA159	41.969	91.469	0.384