Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   MUA21_RS03695 Genome accession   NZ_CP094825
Coordinates   750396..750959 (+) Length   187 a.a.
NCBI ID   WP_046208083.1    Uniprot ID   A0A9Q2QLN9
Organism   Staphylococcus ureilyticus strain IVB6236     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 745396..755959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA21_RS03670 (MUA21_03655) - 746169..747677 (+) 1509 WP_107525685.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  MUA21_RS03675 (MUA21_03660) - 747867..748469 (-) 603 WP_107525684.1 CPBP family glutamic-type intramembrane protease -
  MUA21_RS03680 (MUA21_03665) - 748475..748660 (-) 186 WP_002508073.1 DUF2187 family protein -
  MUA21_RS03685 (MUA21_03670) - 748858..749847 (+) 990 WP_046208081.1 lipoate--protein ligase -
  MUA21_RS03690 (MUA21_03675) - 749926..750144 (-) 219 WP_046208082.1 IDEAL domain-containing protein -
  MUA21_RS03695 (MUA21_03680) comK/comK1 750396..750959 (+) 564 WP_046208083.1 competence protein ComK Regulator
  MUA21_RS03710 (MUA21_03695) - 752015..752365 (-) 351 WP_198644453.1 DUF4870 domain-containing protein -
  MUA21_RS13285 - 752923..753012 (-) 90 WP_019469096.1 SAR1012 family small protein -
  MUA21_RS03715 (MUA21_03700) - 753121..753333 (-) 213 WP_046208085.1 TM2 domain-containing protein -
  MUA21_RS03720 (MUA21_03705) - 753510..754061 (+) 552 WP_107525682.1 GNAT family N-acetyltransferase -
  MUA21_RS03725 (MUA21_03710) - 754146..755084 (-) 939 WP_064209416.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -

Sequence

Protein


Download         Length: 187 a.a.        Molecular weight: 21989.28 Da        Isoelectric Point: 9.5555

>NTDB_id=673473 MUA21_RS03695 WP_046208083.1 750396..750959(+) (comK/comK1) [Staphylococcus ureilyticus strain IVB6236]
MIQPYIIKKGDMSLQPCHLPVGQYEGTRVLRYKEDESTIKERTHKIIDRSCRFYGSSYVFKKEDTIRITGISSKPPILFT
PLFPTYFFPTHSDRKTQNTWINIHYVQSIKSLKDKKCKVNFVDNQSIVVNISAHSMQHQYLNGIYYYYMMDRAARVATFD
PESPIDYTKPQLNIYEALAKYSLFESK

Nucleotide


Download         Length: 564 bp        

>NTDB_id=673473 MUA21_RS03695 WP_046208083.1 750396..750959(+) (comK/comK1) [Staphylococcus ureilyticus strain IVB6236]
ATGATTCAACCGTATATTATTAAAAAAGGTGATATGTCATTACAACCGTGCCATTTACCCGTTGGCCAATACGAAGGAAC
AAGAGTGCTAAGGTATAAAGAAGATGAAAGTACAATAAAAGAACGTACCCACAAAATTATTGACCGCTCTTGTAGATTTT
ATGGTAGTAGTTATGTTTTTAAAAAAGAGGATACCATTCGAATTACAGGTATTAGCAGCAAGCCCCCGATTTTATTCACT
CCTTTATTTCCTACTTATTTTTTTCCAACACATTCTGATAGAAAAACACAAAATACATGGATTAATATCCATTATGTTCA
AAGTATTAAATCACTCAAAGATAAAAAATGCAAAGTGAACTTTGTTGATAATCAATCTATCGTTGTAAACATTTCAGCTC
ATAGCATGCAACATCAATATTTAAATGGTATTTATTATTATTATATGATGGATAGAGCGGCAAGAGTTGCAACTTTTGAT
CCAGAATCTCCTATAGATTATACAAAACCACAATTAAATATATATGAAGCACTTGCAAAGTATTCTTTGTTTGAAAGTAA
ATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(4-152)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

54.098

97.861

0.529
  comK/comK1 Staphylococcus aureus N315

54.098

97.861

0.529