Detailed information NTG0670253

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: MTX16_RS00965
• Genome accession: NZ_CP094624
• Coordinates: 187964..188545 (-)
• Length: 193 a.a.
• NCBI ID: WP_001092373.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain LX43
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 182964..193545

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTX16_RS00935	-	183646..184086 (-)	441	WP_243821055.1	HIT domain-containing protein	-
MTX16_RS00940	-	184178..184345 (-)	168	WP_000508470.1	hypothetical protein	-
MTX16_RS00945	-	184565..184803 (+)	239	Protein_187	hypothetical protein	-
MTX16_RS00950	-	184857..185693 (-)	837	WP_001084759.1	proline/glycine betaine ABC transporter permease	-
MTX16_RS00955	-	185686..186891 (-)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
MTX16_RS00960	-	187063..187920 (+)	858	WP_001227613.1	glycine betaine ABC transporter substrate-binding protein	-
MTX16_RS00965	clpP	187964..188545 (-)	582	WP_001092373.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
MTX16_RS00970	-	188567..189253 (-)	687	WP_000337509.1	RNA polymerase subunit sigma-70	-
MTX16_RS00975	-	189396..189716 (+)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
MTX16_RS00980	rpiA	189721..190383 (+)	663	WP_079004353.1	ribose 5-phosphate isomerase A	-
MTX16_RS00985	-	190498..190932 (+)	435	WP_243821056.1	GNAT family N-acetyltransferase	-
MTX16_RS00990	-	191060..192427 (-)	1368	WP_243821057.1	lytic polysaccharide monooxygenase	-
MTX16_RS00995	-	192869..193228 (-)	360	Protein_197	nucleotide disphospho-sugar-binding domain-containing protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21266.53 Da
• Isoelectric Point: 5.0776

>NTDB_id=670253 MTX16_RS00965 WP_001092373.1 187964..188545(-) (clpP) [Bacillus thuringiensis strain LX43]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKVYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=670253 MTX16_RS00965 WP_001092373.1 187964..188545(-) (clpP) [Bacillus thuringiensis strain LX43]
ATGAATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGATCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAGAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGTATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	97.927	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	97.927	0.497