Detailed information NTG0670123

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MST17_RS01605
• Genome accession: NZ_CP094545
• Coordinates: 342332..343390 (+)
• Length: 352 a.a.
• NCBI ID: WP_078192532.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH16056_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 337332..348390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MST17_RS01590 (MST17_01590)	mraY	337570..338688 (+)	1119	WP_078189386.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
MST17_RS01595 (MST17_01595)	-	338766..339569 (+)	804	WP_180021660.1	putative RNA methyltransferase	-
MST17_RS01600 (MST17_01600)	ponA	339626..342166 (-)	2541	WP_180026111.1	penicillin-binding protein PBP1a	-
MST17_RS01605 (MST17_01605)	comM	342332..343390 (+)	1059	WP_078192532.1	pilus assembly protein PilM	Machinery gene
MST17_RS01610 (MST17_01610)	pilN	343390..344076 (+)	687	WP_180026110.1	PilN domain-containing protein	Machinery gene
MST17_RS01615 (MST17_01615)	pilO	344073..344795 (+)	723	WP_078189381.1	type 4a pilus biogenesis protein PilO	Machinery gene
MST17_RS01620 (MST17_01620)	pilP	344792..345319 (+)	528	WP_078192530.1	pilus assembly protein PilP	Machinery gene
MST17_RS01625 (MST17_01625)	pilQ	345381..347516 (+)	2136	WP_180026128.1	type IV pilus secretin PilQ	Machinery gene
MST17_RS01630 (MST17_01630)	aroK	347553..348098 (+)	546	WP_078189378.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38940.56 Da
• Isoelectric Point: 4.4858

>NTDB_id=670123 MST17_RS01605 WP_078192532.1 342332..343390(+) (comM) [Acinetobacter sp. YH16056_T]
MLRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDCLERAINLANTQTTNAAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARAEVIQL
AGLTPKIGDVESFAIENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYALSFEE
AGRAKKTRALPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=670123 MST17_RS01605 WP_078192532.1 342332..343390(+) (comM) [Acinetobacter sp. YH16056_T]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTTTTGGAACT
TTCTGTAAAGAGTGGGCGGTATTGGGTAGAAAGCTATGCTTTGGTGCCATTACCAGAAGGAAGTGTTGTTGAAAAGAACA
TATTGAATCCGGAAGCTGTCGGTGACTGTTTAGAGCGCGCAATTAATTTGGCCAATACGCAGACCACTAATGCAGCTTTG
GCGGTTCCAACGTCGATGGTGATTACAAAAATCATCGAAATGGACGCAGATATGAACGATGATGAACGTGAAATTCAGAT
TCGTGATGATGCTGAGCAATATATTCCGTTCCCACTTGATGAAGCGAGCCTTGATTTTGAGGTCTTGCCAGATCGTCTGT
CCAACCCAAATCGTGTCAATGTTTTGCTTGTCGCTACGCGTATTGAAAATGTTGAAGCGCGTGCGGAAGTCATTCAGCTT
GCTGGTCTTACACCAAAAATTGGTGATGTAGAAAGCTTTGCAATTGAAAATGCATTTAAAGTTTTCTCAGATACTTTGCC
AATGGGTGTGAATACCGTGGGTATTTTAGATATTGGTCATAGTATGACGACCTTATCTGTCATGCAGAATAACAAAGTGA
TTTATACCCGTGAGCAAGTGTTTGGTGGCAAACAATTGACACAGGAAATTCAAAATCGCTATGCATTGTCTTTCGAAGAA
GCAGGTCGAGCGAAAAAAACACGTGCCTTGCCAGATGATTATGATATCGAAGTCTTAGAACCCTTCTTAGAAGCTGTCGT
TCAACAAGCAGCACGTTCTTTACAGTTCTTTTTCTCATCTTCACAGTTCAACGAAATTGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCGGGGCTTGCAAAATTACTTCAACAAAAATTGGGTTACCGCGTCACGATTGCCAATCCATTCTTA
CAAATGGGTTTTTCACCTCAAATTGATATTAAAAAAATTGAAAATGATGCCTCATCACTCATGGTGGCATGCGGTCTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	40.678	100	0.409