Detailed information NTG0670088

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MST16_RS07650
• Genome accession: NZ_CP094541
• Coordinates: 1568889..1570079 (+)
• Length: 396 a.a.
• NCBI ID: WP_180092114.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH16040_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1563889..1575079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MST16_RS07640 (MST16_07620)	-	1565254..1566837 (-)	1584	WP_180011452.1	ATP-binding cassette domain-containing protein	-
MST16_RS07645 (MST16_07625)	-	1567536..1568618 (+)	1083	WP_180011454.1	3-deoxy-7-phosphoheptulonate synthase	-
MST16_RS07650 (MST16_07630)	pilU	1568889..1570079 (+)	1191	WP_180092114.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MST16_RS07655 (MST16_07635)	gcvH	1570177..1570551 (-)	375	WP_078193810.1	glycine cleavage system protein GcvH	-
MST16_RS07660 (MST16_07640)	-	1570624..1571652 (-)	1029	WP_180011731.1	AraC family transcriptional regulator	-
MST16_RS07665 (MST16_07645)	-	1571801..1572250 (-)	450	WP_180011729.1	MaoC family dehydratase	-
MST16_RS07670 (MST16_07650)	-	1572228..1574102 (-)	1875	WP_180011727.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 44741.15 Da
• Isoelectric Point: 6.5094

>NTDB_id=670088 MST16_RS07650 WP_180092114.1 1568889..1570079(+) (pilU) [Acinetobacter sp. YH16040_T]
MYTAELLEEARRFMFHMLTKVVEYGGSDLFITADFPPSIKHQGMMKPFGQQALDAEKTKLFAYSLMNEKQRKEFEKELEC
NFAISVPNVSRFRVNVFQQQLHVGMVIRTITAEIPNFEKLKLPASLKHVIMEKRGLVLVVGGTGSGKSTSLAALIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFTETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIVSQRLIRTEDGKGRRAAVEIMLNTPLISDLILKGEFHELKAIMAKS
RELGMQTFDQALFDLYNDGAISYEEALRNADSTNELRLQIKLKSSRANGTSAAAQSFSMVEEKKEEPESTEASEEI

Nucleotide

• Length: 1191 bp

>NTDB_id=670088 MST16_RS07650 WP_180092114.1 1568889..1570079(+) (pilU) [Acinetobacter sp. YH16040_T]
ATGTACACTGCTGAATTGCTGGAAGAAGCACGCCGTTTTATGTTCCACATGTTAACCAAAGTGGTTGAATATGGTGGTTC
TGATTTATTTATTACGGCAGATTTTCCACCAAGTATTAAACATCAAGGCATGATGAAACCCTTTGGGCAGCAAGCGCTTG
ATGCTGAGAAAACAAAGCTTTTCGCCTATAGTTTGATGAATGAGAAGCAGCGCAAAGAATTTGAGAAAGAATTAGAATGT
AACTTTGCGATTAGTGTGCCAAACGTTTCGCGTTTTCGTGTCAATGTATTTCAGCAACAGTTACATGTAGGTATGGTCAT
TCGTACCATTACCGCAGAAATTCCAAATTTTGAAAAGCTTAAATTACCGGCTTCGCTTAAGCACGTGATTATGGAAAAAC
GTGGTTTGGTTTTAGTGGTTGGCGGAACAGGTTCAGGGAAATCAACCTCTTTAGCGGCGCTGATTGATTATCGAAATGAA
AACAGCGCAGGGCATATCATCACTGTTGAAGACCCAGTGGAATATGTGCATAAGCATAAAAAATCCATGATTACACATCG
TGAAGTCGGTGTAGACAGTCATTCGTGGCATAACGCCTTAAAAAACACTCTAAGACAAGCGCCAGATGTGATTTTAATCG
GTGAAATTCGTGACACCGAGACGATGGAACATGCGATTGCCTTTACTGAAACAGGGCATTTATGTTTAGGTACGCTACAT
TCAAATAATGCCAATCAAACCCTAGATCGAATCATTAACTTCTTCCCAGAAGAGCGAAGAAATCAATTGCTTATGGATTT
ATCGAGCAATATGAAAGCGATTGTTTCGCAGCGTTTAATCCGGACTGAAGATGGTAAAGGACGCCGTGCAGCCGTTGAAA
TCATGTTAAACACGCCGCTTATTTCAGATTTGATTTTGAAAGGTGAGTTTCATGAATTAAAAGCGATCATGGCAAAATCT
CGTGAACTTGGGATGCAAACTTTCGACCAAGCTTTATTTGATTTATATAATGACGGCGCAATTTCTTATGAAGAGGCCTT
AAGAAATGCTGATTCAACCAATGAACTACGTTTGCAAATTAAACTAAAAAGTTCACGTGCAAATGGTACTTCAGCGGCTG
CGCAATCGTTTAGTATGGTTGAAGAAAAGAAAGAAGAACCTGAAAGCACCGAAGCTTCGGAAGAAATATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (105-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.92	87.879	0.535
pilU	Acinetobacter baylyi ADP1	54.348	92.929	0.505
pilU	Vibrio cholerae strain A1552	50.824	91.919	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.257	95.202	0.374
pilT	Acinetobacter nosocomialis M2	43.333	83.333	0.361
pilT	Acinetobacter baumannii D1279779	43.333	83.333	0.361
pilT	Acinetobacter baumannii strain A118	43.333	83.333	0.361