Detailed information
Bioinformatically predicted
Overview
| Name | comEA/celA/cilE | Type | Machinery gene |
| Locus tag | OHA23_RS29315 | Genome accession | NZ_CP108878 |
| Coordinates | 6530084..6530509 (+) | Length | 141 a.a. |
| NCBI ID | WP_323180432.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00822 | ||
| Function | dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6525084..6535509
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHA23_RS29305 (OHA23_29295) | - | 6527350..6528141 (+) | 792 | WP_266690955.1 | hypothetical protein | - |
| OHA23_RS29310 (OHA23_29300) | - | 6528265..6529110 (+) | 846 | WP_259927456.1 | DegV family protein | - |
| OHA23_RS29315 | comEA/celA/cilE | 6530084..6530509 (+) | 426 | WP_323180432.1 | ComEA family DNA-binding protein | Machinery gene |
| OHA23_RS29320 (OHA23_29310) | - | 6530506..6533139 (+) | 2634 | WP_266690957.1 | ComEC/Rec2 family competence protein | - |
| OHA23_RS29325 (OHA23_29315) | - | 6533622..6534506 (+) | 885 | WP_266690959.1 | YceI family protein | - |
| OHA23_RS29330 (OHA23_29320) | - | 6534522..6534767 (-) | 246 | WP_199883160.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 14176.94 Da Isoelectric Point: 7.2050
>NTDB_id=668152 OHA23_RS29315 WP_323180432.1 6530084..6530509(+) (comEA/celA/cilE) [Streptomyces sp. NBC_00822]
MSGKVRRPGIRELPSGSRVADALRAAGGVRDGADLTGLNRARVLMDGEQIVVGAPPGSSTAGGAAGVAMGSGGGSAAAGP
VSLNTATVEQLDTLPGVGPVLAQHIVDYRTQHGGFRSIDELREVNGIGDRRFADLQPLVGP
MSGKVRRPGIRELPSGSRVADALRAAGGVRDGADLTGLNRARVLMDGEQIVVGAPPGSSTAGGAAGVAMGSGGGSAAAGP
VSLNTATVEQLDTLPGVGPVLAQHIVDYRTQHGGFRSIDELREVNGIGDRRFADLQPLVGP
Nucleotide
Download Length: 426 bp
>NTDB_id=668152 OHA23_RS29315 WP_323180432.1 6530084..6530509(+) (comEA/celA/cilE) [Streptomyces sp. NBC_00822]
GTGAGCGGAAAGGTGCGAAGGCCTGGCATCCGTGAACTGCCTTCCGGATCAAGGGTCGCCGATGCGTTACGTGCGGCGGG
CGGAGTCCGGGACGGAGCGGACCTCACCGGGCTCAACCGGGCACGGGTGCTCATGGACGGAGAGCAGATCGTGGTGGGCG
CCCCGCCAGGATCTTCAACTGCCGGTGGGGCGGCAGGTGTCGCGATGGGCAGCGGCGGCGGGAGCGCTGCGGCCGGCCCG
GTCAGCCTCAACACCGCGACCGTCGAACAGTTGGACACGCTGCCGGGTGTCGGCCCGGTTCTGGCCCAGCACATCGTCGA
CTACCGCACACAGCACGGCGGTTTCCGGTCCATCGATGAACTGCGTGAGGTCAACGGGATCGGTGACCGCAGGTTCGCCG
ACCTCCAACCATTGGTGGGGCCATGA
GTGAGCGGAAAGGTGCGAAGGCCTGGCATCCGTGAACTGCCTTCCGGATCAAGGGTCGCCGATGCGTTACGTGCGGCGGG
CGGAGTCCGGGACGGAGCGGACCTCACCGGGCTCAACCGGGCACGGGTGCTCATGGACGGAGAGCAGATCGTGGTGGGCG
CCCCGCCAGGATCTTCAACTGCCGGTGGGGCGGCAGGTGTCGCGATGGGCAGCGGCGGCGGGAGCGCTGCGGCCGGCCCG
GTCAGCCTCAACACCGCGACCGTCGAACAGTTGGACACGCTGCCGGGTGTCGGCCCGGTTCTGGCCCAGCACATCGTCGA
CTACCGCACACAGCACGGCGGTTTCCGGTCCATCGATGAACTGCGTGAGGTCAACGGGATCGGTGACCGCAGGTTCGCCG
ACCTCCAACCATTGGTGGGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
38.849 |
98.582 |
0.383 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
37.762 |
100 |
0.383 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
33.962 |
100 |
0.383 |
| comEA | Streptococcus thermophilus LMD-9 |
39.098 |
94.326 |
0.369 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
37.41 |
98.582 |
0.369 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
37.41 |
98.582 |
0.369 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
37.41 |
98.582 |
0.369 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
36.691 |
98.582 |
0.362 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
35.664 |
100 |
0.362 |