Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   SCSC_RS07465 Genome accession   NZ_AP014647
Coordinates   1515988..1517484 (-) Length   498 a.a.
NCBI ID   WP_006268182.1    Uniprot ID   F9P7H7
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1510988..1522484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS07440 (SCSC_1529) - 1510998..1511963 (+) 966 WP_006270237.1 LacI family DNA-binding transcriptional regulator -
  SCSC_RS07445 (SCSC_1530) - 1512048..1512866 (-) 819 WP_006270209.1 Cof-type HAD-IIB family hydrolase -
  SCSC_RS07450 (SCSC_1531) amiF 1513052..1513975 (-) 924 WP_003070566.1 ATP-binding cassette domain-containing protein Regulator
  SCSC_RS07455 (SCSC_1532) amiE 1513986..1515053 (-) 1068 WP_006268109.1 ABC transporter ATP-binding protein Regulator
  SCSC_RS07460 (SCSC_1533) amiD 1515062..1515988 (-) 927 WP_006270263.1 oligopeptide ABC transporter permease OppC Regulator
  SCSC_RS07465 (SCSC_1534) amiC 1515988..1517484 (-) 1497 WP_006268182.1 ABC transporter permease Regulator
  SCSC_RS07470 (SCSC_1535) amiA3 1517848..1519827 (-) 1980 WP_006270242.1 peptide ABC transporter substrate-binding protein Regulator
  SCSC_RS07475 (SCSC_1536) amiA3 1520023..1521999 (-) 1977 WP_006270291.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55843.07 Da        Isoelectric Point: 10.0448

>NTDB_id=66580 SCSC_RS07465 WP_006268182.1 1515988..1517484(-) (amiC) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKTNYENTIFERMGYIDYYDTKELQEKAS
KENPSVTVEPTNANKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYL
RIENDPAIGWSVVGSGTKHKYLLYFNGQFPFVHQNFVRLNLGISYPTYANLPVLQVISQGQGQTKTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSALGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEQEISNKHIFKNAMVPLVSSIPGAIIGVITGATLTETIFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTMLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=66580 SCSC_RS07465 WP_006268182.1 1515988..1517484(-) (amiC) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACATTGACTTACACCATTAT
CTATACTATGGTGCCAAGAAAGTTGATTTTCAAGCAGGATCCGAACTATAATAAAATAGCTACAACTCCTGATAAAAAGA
CTAATTATGAAAATACAATTTTTGAGCGTATGGGTTACATTGACTACTATGATACGAAGGAATTACAAGAAAAAGCTAGT
AAAGAGAATCCTTCTGTAACAGTAGAACCTACTAATGCAAATAAAAAAATCTATGAAGCTTACATCAAAAAGTTGGGGCG
TGGTTGGAAATTGCAGCAATTCAAAGAAAGTAAGCAATTTTATGCAACTCGAGAGGTTCCAGTTTATGAACGCGTTCTTG
GTTTCTATGGCAATTTGATTCAAATTGACCATACAGGTGCTGTGAAAGATGCTTCTAATCCAAACTTGAAGCGTTATCTT
CGTATTGAAAATGATCCTGCTATTGGTTGGTCTGTTGTTGGTTCTGGAACGAAACATAAGTATTTATTGTACTTTAATGG
GCAATTTCCGTTTGTTCATCAGAATTTTGTGAGATTAAATCTAGGTATTTCTTATCCAACTTATGCGAATCTTCCTGTTT
TACAAGTTATTTCGCAAGGGCAAGGACAAACGAAAACTTCTGAAGTTCAATTCCCGACAGGTAAGAAAACTTCGTCTGTC
AACATTTATACAAGAACTTATAAATCTCCAAAACAAGCCGATGCGCGTGATGTTGCCAATTATGGAAAAGATGATCCATA
TACGGCAACAGAAAGTAACTACCAATATCCATCAATGATTGTAAGTTCTTCAATTGTTGGTTTGATTGGTCTGGCTTTAT
CTTACTTAATTGCTGTTCCGCTTGGATCTTACATGGCTCGCTTTAAGAATACATTGTTTGATAGTATTTCGACAGGAGCC
TTGACATTCTTGATGTCATTGCCAACTATCGCTTTGGTTTATATCATTCGGTTGATTGGTTCGGCTCTTGGATTGCCGGA
TTCCTTCCCTATTTTGGGAGCGGGAGATTGGCGTTCCTATGTTCTTCCGGCAGTTATTCTTGGGCTTTTGAGTGCGCCTT
GGACAGCTGTTTGGATTCGTCGTTATATGATTGACCTGCAATCACAAGACTTTGTTCGTTTTGCACGGGCAAAAGGTCTC
TCTGAACAAGAAATTTCAAATAAACATATTTTTAAAAACGCCATGGTACCACTTGTATCCAGTATACCTGGTGCTATTAT
CGGAGTTATCACAGGTGCGACTTTGACCGAAACAATCTTTGCTTTCCCTGGAATGGGTAAAATGCTGATTGACTCTGTTA
AAGCATCTAATAATTCTATGGTCGTTGGTCTTGTATTTATCTTTACATGTCTTTCTATTTTCGCTCTTCTATTGGGTGAT
ATTCTGATGACCATGCTTGACCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P7H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.321

100

0.803
  amiC Streptococcus thermophilus LMD-9

79.92

100

0.799
  amiC Streptococcus thermophilus LMG 18311

79.719

100

0.797

Multiple sequence alignment