Detailed information NTG0664580

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG254_RS17100
• Genome accession: NZ_CP108659
• Coordinates: 3822556..3823839 (-)
• Length: 427 a.a.
• NCBI ID: WP_147999245.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01092
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3817556..3828839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG254_RS17090 (OG254_17045)	-	3818734..3821358 (-)	2625	WP_405582657.1	valine--tRNA ligase	-
OG254_RS17095 (OG254_17050)	-	3821495..3822484 (+)	990	WP_405582660.1	hypothetical protein	-
OG254_RS17100 (OG254_17055)	clpX	3822556..3823839 (-)	1284	WP_147999245.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG254_RS17105 (OG254_17060)	clpP	3824019..3824699 (-)	681	WP_351191566.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG254_RS17110 (OG254_17065)	clpP	3824771..3825379 (-)	609	WP_187284805.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG254_RS17115 (OG254_17070)	tig	3825719..3827125 (-)	1407	WP_405582664.1	trigger factor	-
OG254_RS17130 (OG254_17085)	-	3827697..3828104 (-)	408	WP_405582667.1	SseB family protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46732.51 Da
• Isoelectric Point: 4.7809

>NTDB_id=664580 OG254_RS17100 WP_147999245.1 3822556..3823839(-) (clpX) [Streptomyces sp. NBC_01092]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARRGPGEQKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=664580 OG254_RS17100 WP_147999245.1 3822556..3823839(-) (clpX) [Streptomyces sp. NBC_01092]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCTGAGACCA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAAGCG
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACCGCGCTGACGGAAGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAATCCGTCGATCACGCGAGACGTCAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACGGCCTCGGTCCCTCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTGGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTTCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGCGACGCACGCCGCGGTCCGGGGGAGCAGAAGTCGGC
GTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	94.145	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.253	0.525