Detailed information NTG0066166

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SRT_RS02475
• Genome accession: NZ_AP014612
• Coordinates: 465244..465858 (+)
• Length: 204 a.a.
• NCBI ID: WP_255262943.1
• Uniprot ID: -
• Organism: Streptococcus troglodytae strain TKU 31
• Function: degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 460244..470858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SRT_RS02460 (SRT_04580)	-	461918..463012 (+)	1095	WP_128832920.1	cystathionine gamma-synthase	-
SRT_RS02465 (SRT_04590)	-	463030..464193 (+)	1164	WP_128832921.1	MalY/PatB family protein	-
SRT_RS02470 (SRT_04600)	upp	464405..465033 (+)	629	Protein_436	uracil phosphoribosyltransferase	-
SRT_RS02475 (SRT_04610)	clpP	465244..465858 (+)	615	WP_255262943.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
SRT_RS02480	-	465974..466412 (+)	439	Protein_438	YlbF family regulator	-
SRT_RS02485	-	466445..466666 (+)	222	WP_128832922.1	DUF2129 domain-containing protein	-
SRT_RS02490 (SRT_04640)	-	466779..467939 (+)	1161	WP_128832923.1	ABC transporter substrate-binding protein	-
SRT_RS02495 (SRT_04650)	-	468023..468892 (+)	870	WP_002262676.1	branched-chain amino acid ABC transporter permease	-
SRT_RS02500 (SRT_04660)	-	468896..469852 (+)	957	WP_128832924.1	branched-chain amino acid ABC transporter permease	-
SRT_RS02505 (SRT_04670)	-	469852..470616 (+)	765	WP_128832925.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22665.10 Da
• Isoelectric Point: 5.3673

>NTDB_id=66166 SRT_RS02475 WP_255262943.1 465244..465858(+) (clpP) [Streptococcus troglodytae strain TKU 31]
MELKEKYSMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYINSPGGSVSAG
LAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQSDMAIAAEQLLKTRKKLEK
ILSDNSGKTVKQIHKDAERDYWMDAKETLKYGFIDEIMENNELK

Nucleotide

• Length: 615 bp

>NTDB_id=66166 SRT_RS02475 WP_255262943.1 465244..465858(+) (clpP) [Streptococcus troglodytae strain TKU 31]
ATTGAATTAAAGGAGAAATACAGTATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGTGAACGCTCTTATGATATTTA
TTCACGTCTATTAAAAGATCGTATTATTATGTTGACTGGTCCTGTTGAAGACAATATGGCAAATTCCATTATTGCTCAGT
TACTGTTTCTTGATGCACAAGATAATACCAAAGATATTTATCTTTATATTAATTCACCGGGTGGTTCTGTTTCAGCAGGC
CTTGCTATTGTTGATACCATGAACTTTATTAAGTCTGATGTTCAGACAATTGTCATGGGTATTGCTGCTTCCATGGGAAC
AATCATCGCGTCTAGCGGTGCTAAAGGAAAACGTTTTATGTTACCAAATGCAGAATATCTTATCCATCAGCCAATGGGCG
GTACAGGCGGTGGCACACAGCAGTCTGATATGGCTATTGCTGCCGAACAATTGCTTAAAACACGCAAAAAATTAGAAAAG
ATTCTATCAGATAATTCTGGAAAAACAGTAAAACAAATTCATAAGGATGCTGAACGTGATTATTGGATGGATGCTAAGGA
AACATTAAAGTATGGTTTCATCGATGAAATCATGGAAAATAATGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus mutans UA159	99.51	100	0.995
clpP	Streptococcus pyogenes JRS4	90.306	96.078	0.868
clpP	Streptococcus pyogenes MGAS315	90.306	96.078	0.868
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.755	96.078	0.843
clpP	Streptococcus thermophilus LMD-9	87.245	96.078	0.838
clpP	Lactococcus lactis subsp. cremoris KW2	87.245	96.078	0.838
clpP	Streptococcus thermophilus LMG 18311	87.245	96.078	0.838
clpP	Streptococcus pneumoniae Rx1	86.154	95.588	0.824
clpP	Streptococcus pneumoniae D39	86.154	95.588	0.824
clpP	Streptococcus pneumoniae R6	86.154	95.588	0.824
clpP	Streptococcus pneumoniae TIGR4	86.154	95.588	0.824
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	94.608	0.544
clpP	Bacillus subtilis subsp. subtilis str. 168	55.838	96.569	0.539