Detailed information NTG0065571

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OXB_RS00895
• Genome accession: NZ_AP013294
• Coordinates: 157831..158439 (-)
• Length: 202 a.a.
• NCBI ID: WP_041071017.1
• Uniprot ID: -
• Organism: Bacillus sp. OxB-1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 152831..163439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXB_RS00870 (OXB_0153)	gap	153942..154955 (-)	1014	WP_041071005.1	type I glyceraldehyde-3-phosphate dehydrogenase	-
OXB_RS00880	-	155951..156181 (-)	231	WP_041071011.1	glutaredoxin family protein	-
OXB_RS00885 (OXB_0155)	-	156258..157073 (-)	816	WP_052483813.1	TPM domain-containing protein	-
OXB_RS00890 (OXB_0156)	-	157070..157648 (-)	579	WP_041071014.1	LemA family protein	-
OXB_RS00895 (OXB_0157)	clpP	157831..158439 (-)	609	WP_041071017.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
OXB_RS00905 (OXB_0158)	-	159118..159732 (+)	615	WP_158333621.1	thiamine phosphate synthase	-
OXB_RS00910 (OXB_0159)	thiS	159759..159962 (+)	204	WP_041071023.1	sulfur carrier protein ThiS	-
OXB_RS00915 (OXB_0160)	-	159965..160732 (+)	768	WP_041071026.1	thiazole synthase	-
OXB_RS00920 (OXB_0161)	-	160729..161745 (+)	1017	WP_041071029.1	ThiF family adenylyltransferase	-
OXB_RS00925 (OXB_0162)	-	161837..162028 (+)	192	WP_041071031.1	hypothetical protein	-
OXB_RS00930 (OXB_0163)	-	162025..162258 (+)	234	WP_041071034.1	hypothetical protein	-
OXB_RS00935 (OXB_0165)	-	162474..162731 (-)	258	WP_041071037.1	HPr family phosphocarrier protein	-

Sequence

Protein

• Length: 202 a.a.
• Molecular weight: 22366.69 Da
• Isoelectric Point: 4.7890

>NTDB_id=65571 OXB_RS00895 WP_041071017.1 157831..158439(-) (clpP) [Bacillus sp. OxB-1]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAEDPEKDVSIYINSPGGSITAGMAIYDT
MQFIKPDIQTICIGMAASMGSFLLTAGTKGKRYALPNAEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNTILSERTGQ
PVEVIARDTDRDNFMTAERAKEYGLIDHIITRSDMKLTDNEK

Nucleotide

• Length: 609 bp

>NTDB_id=65571 OXB_RS00895 WP_041071017.1 157831..158439(-) (clpP) [Bacillus sp. OxB-1]
ATGAATCTAATACCTACAGTAATCGAGCAGACGAACCGGGGAGAACGAGCTTACGATATTTATTCCCGCTTATTAAAAGA
CCGGATCATCATGTTGGGGAGCGCCATCGACGATAATGTGGCGAACTCCATTGTAGCGCAACTTCTCTTCCTGGAAGCGG
AAGATCCTGAAAAAGACGTGTCCATCTACATCAACAGCCCGGGCGGAAGCATCACAGCCGGAATGGCGATCTATGACACG
ATGCAGTTCATCAAACCGGACATCCAGACGATTTGTATCGGGATGGCGGCGTCCATGGGATCCTTCCTCCTCACAGCCGG
AACGAAAGGGAAACGGTATGCGTTGCCGAACGCGGAAGTCATGATCCACCAACCACTCGGCGGTGCTCAAGGGCAGGCGA
CGGAAATCGAAATCGCCGCAAAACGCATCTTGTTCCTGCGTGAAAAATTGAACACGATCCTTTCCGAGCGCACGGGCCAA
CCGGTCGAAGTGATTGCACGCGACACGGACCGCGACAACTTCATGACTGCCGAACGTGCCAAAGAATATGGACTCATCGA
TCATATCATCACACGCAGCGATATGAAACTGACAGACAACGAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	85.204	97.03	0.827
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	94.554	0.639
clpP	Streptococcus thermophilus LMG 18311	58.673	97.03	0.569
clpP	Streptococcus thermophilus LMD-9	58.673	97.03	0.569
clpP	Lactococcus lactis subsp. cremoris KW2	57.143	97.03	0.554
clpP	Streptococcus pneumoniae D39	56.41	96.535	0.545
clpP	Streptococcus pneumoniae Rx1	56.41	96.535	0.545
clpP	Streptococcus pneumoniae R6	56.41	96.535	0.545
clpP	Streptococcus pneumoniae TIGR4	56.41	96.535	0.545
clpP	Streptococcus mutans UA159	55.33	97.525	0.54
clpP	Streptococcus pyogenes JRS4	55.612	97.03	0.54
clpP	Streptococcus pyogenes MGAS315	55.612	97.03	0.54
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.102	97.03	0.535