Detailed information
Bioinformatically predicted
Overview
| Name | chiS | Type | Regulator |
| Locus tag | OHT93_RS10595 | Genome accession | NZ_CP108130 |
| Coordinates | 2303345..2303719 (+) | Length | 124 a.a. |
| NCBI ID | WP_406266845.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00191 | ||
| Function | chitin sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2298345..2308719
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHT93_RS10575 (OHT93_10545) | - | 2298524..2301535 (-) | 3012 | WP_406266837.1 | bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase | - |
| OHT93_RS10580 (OHT93_10550) | - | 2301715..2302227 (+) | 513 | WP_406266839.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| OHT93_RS10585 (OHT93_10555) | - | 2302259..2302690 (+) | 432 | WP_406279337.1 | VOC family protein | - |
| OHT93_RS10590 (OHT93_10560) | - | 2302971..2303345 (+) | 375 | WP_406266842.1 | response regulator | - |
| OHT93_RS10595 (OHT93_10565) | chiS | 2303345..2303719 (+) | 375 | WP_406266845.1 | response regulator transcription factor | Regulator |
| OHT93_RS10600 (OHT93_10570) | - | 2303716..2304816 (+) | 1101 | WP_406266849.1 | HEAT repeat domain-containing protein | - |
| OHT93_RS10605 (OHT93_10575) | - | 2304813..2306354 (+) | 1542 | WP_406266852.1 | glycosyltransferase | - |
| OHT93_RS10610 (OHT93_10580) | - | 2306351..2308453 (+) | 2103 | WP_406266854.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 124 a.a. Molecular weight: 13275.20 Da Isoelectric Point: 4.5657
>NTDB_id=654565 OHT93_RS10595 WP_406266845.1 2303345..2303719(+) (chiS) [Streptomyces sp. NBC_00191]
MPRVLIADDDGDIRDLVAFKLTQSGHEVIAVEDGMAALKAARSQPVDVALLDIRMPGMSGLDVCRELRAAPETASLPVIL
ITARSQEGDIETGFAAGADDYIVKPFSPRELSSRVQAVLTRASR
MPRVLIADDDGDIRDLVAFKLTQSGHEVIAVEDGMAALKAARSQPVDVALLDIRMPGMSGLDVCRELRAAPETASLPVIL
ITARSQEGDIETGFAAGADDYIVKPFSPRELSSRVQAVLTRASR
Nucleotide
Download Length: 375 bp
>NTDB_id=654565 OHT93_RS10595 WP_406266845.1 2303345..2303719(+) (chiS) [Streptomyces sp. NBC_00191]
ATGCCTCGAGTCCTCATAGCCGATGACGATGGCGACATACGGGACCTCGTCGCTTTCAAACTGACCCAGAGCGGTCATGA
GGTCATCGCCGTGGAGGACGGCATGGCTGCGCTCAAGGCAGCGCGCAGCCAGCCGGTCGATGTCGCTCTGCTCGACATAC
GCATGCCCGGGATGTCCGGCCTGGATGTGTGCCGCGAACTCCGCGCGGCGCCCGAGACCGCCTCGCTCCCCGTCATCCTG
ATCACTGCCCGCTCCCAGGAGGGAGACATCGAGACGGGATTCGCCGCGGGAGCCGACGACTACATCGTCAAGCCGTTCAG
CCCGCGCGAACTGAGCAGCCGGGTCCAGGCCGTGCTCACCAGGGCCTCCCGGTGA
ATGCCTCGAGTCCTCATAGCCGATGACGATGGCGACATACGGGACCTCGTCGCTTTCAAACTGACCCAGAGCGGTCATGA
GGTCATCGCCGTGGAGGACGGCATGGCTGCGCTCAAGGCAGCGCGCAGCCAGCCGGTCGATGTCGCTCTGCTCGACATAC
GCATGCCCGGGATGTCCGGCCTGGATGTGTGCCGCGAACTCCGCGCGGCGCCCGAGACCGCCTCGCTCCCCGTCATCCTG
ATCACTGCCCGCTCCCAGGAGGGAGACATCGAGACGGGATTCGCCGCGGGAGCCGACGACTACATCGTCAAGCCGTTCAG
CCCGCGCGAACTGAGCAGCCGGGTCCAGGCCGTGCTCACCAGGGCCTCCCGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| chiS | Vibrio cholerae strain A1552 |
44.167 |
96.774 |
0.427 |
| scnR | Streptococcus mutans UA159 |
40.323 |
100 |
0.403 |
| vicR | Streptococcus mutans UA159 |
37.903 |
100 |
0.379 |
| micA | Streptococcus pneumoniae Cp1015 |
38.211 |
99.194 |
0.379 |
| ciaR | Streptococcus pneumoniae Rx1 |
37.097 |
100 |
0.371 |
| ciaR | Streptococcus pneumoniae D39 |
37.097 |
100 |
0.371 |
| ciaR | Streptococcus pneumoniae R6 |
37.097 |
100 |
0.371 |
| ciaR | Streptococcus pneumoniae TIGR4 |
37.097 |
100 |
0.371 |
| ciaR | Streptococcus mutans UA159 |
36.29 |
100 |
0.363 |