Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | L3V47_RS16895 | Genome accession | NZ_CP091480 |
| Coordinates | 3717037..3717357 (+) | Length | 106 a.a. |
| NCBI ID | WP_021140625.1 | Uniprot ID | T0QN50 |
| Organism | Aeromonas salmonicida strain ASscau0313 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3712037..3722357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3V47_RS16870 (L3V47_16850) | trhA | 3712677..3713312 (-) | 636 | WP_277734922.1 | PAQR family membrane homeostasis protein TrhA | - |
| L3V47_RS16875 (L3V47_16855) | - | 3713537..3715072 (+) | 1536 | WP_277734923.1 | pyridoxal-dependent decarboxylase | - |
| L3V47_RS16880 (L3V47_16860) | - | 3715158..3715709 (+) | 552 | WP_005318063.1 | septation protein A | - |
| L3V47_RS16885 (L3V47_16865) | - | 3715737..3716033 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| L3V47_RS16890 (L3V47_16870) | cysQ | 3716115..3716870 (-) | 756 | WP_265432368.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| L3V47_RS16895 (L3V47_16875) | comEA | 3717037..3717357 (+) | 321 | WP_021140625.1 | ComEA family DNA-binding protein | Machinery gene |
| L3V47_RS16900 (L3V47_16880) | galU | 3717452..3718363 (+) | 912 | WP_265432370.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| L3V47_RS16905 (L3V47_16885) | - | 3718577..3719974 (+) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| L3V47_RS16910 (L3V47_16890) | - | 3720050..3721021 (-) | 972 | WP_265432322.1 | response regulator | - |
| L3V47_RS16915 (L3V47_16895) | - | 3721378..3722076 (+) | 699 | WP_265432321.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11211.08 Da Isoelectric Point: 9.6863
>NTDB_id=651632 L3V47_RS16895 WP_021140625.1 3717037..3717357(+) (comEA) [Aeromonas salmonicida strain ASscau0313]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=651632 L3V47_RS16895 WP_021140625.1 3717037..3717357(+) (comEA) [Aeromonas salmonicida strain ASscau0313]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTCTGCTGGCCGCCGACAA
GCCGGCAGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTCTGCTGGCCGCCGACAA
GCCGGCAGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |