Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | OG485_RS08840 | Genome accession | NZ_CP108013 |
| Coordinates | 2043104..2043739 (+) | Length | 211 a.a. |
| NCBI ID | WP_328665592.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00328 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2038104..2048739
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OG485_RS08810 (OG485_08825) | ureG | 2038178..2038855 (-) | 678 | WP_328665583.1 | urease accessory protein UreG | - |
| OG485_RS08815 (OG485_08830) | - | 2039202..2039876 (-) | 675 | WP_328665585.1 | urease accessory UreF family protein | - |
| OG485_RS08820 (OG485_08835) | - | 2039876..2041597 (-) | 1722 | WP_328665587.1 | urease subunit alpha | - |
| OG485_RS08825 (OG485_08840) | - | 2041590..2041901 (-) | 312 | WP_328665589.1 | urease subunit beta | - |
| OG485_RS08830 (OG485_08845) | - | 2041917..2042219 (-) | 303 | WP_326789136.1 | urease subunit gamma | - |
| OG485_RS08835 (OG485_08850) | - | 2042640..2042918 (-) | 279 | WP_328674285.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| OG485_RS08840 (OG485_08855) | clpP | 2043104..2043739 (+) | 636 | WP_328665592.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| OG485_RS08845 (OG485_08860) | - | 2043747..2044052 (+) | 306 | WP_328665594.1 | hypothetical protein | - |
| OG485_RS08850 (OG485_08865) | - | 2044589..2045062 (+) | 474 | WP_326789132.1 | C40 family peptidase | - |
| OG485_RS08855 (OG485_08870) | - | 2045133..2045774 (-) | 642 | WP_328665597.1 | LysE family translocator | - |
| OG485_RS08860 (OG485_08875) | - | 2045884..2046846 (+) | 963 | WP_328665599.1 | LysR family transcriptional regulator | - |
| OG485_RS08865 (OG485_08880) | - | 2046923..2047381 (-) | 459 | WP_326789129.1 | ATP-binding protein | - |
| OG485_RS08870 (OG485_08885) | - | 2047594..2048451 (+) | 858 | WP_328665602.1 | helix-turn-helix transcriptional regulator | - |
| OG485_RS08875 (OG485_08890) | - | 2048463..2048687 (+) | 225 | WP_328665603.1 | DUF397 domain-containing protein | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22964.08 Da Isoelectric Point: 6.2299
>NTDB_id=651403 OG485_RS08840 WP_328665592.1 2043104..2043739(+) (clpP) [Streptomyces sp. NBC_00328]
MRSPSARHVLPEFTERTSSGHRTLDPYSKLLSERIVFLGTPIDDTSANDVMAQFVYLEHQAPEQDISLYINSPGGSFSAM
TAIYDTMRFVTCDVETVCLGQAASSAAVLLAGGTPGKRLALPGARVLLHQPSVPEPVQGQTSDLVIRAGELLRTREILED
MLVRHTGRSPERVAADIERDKIFDAPAALAYGLIDRIVPSRRASHETPGAR
MRSPSARHVLPEFTERTSSGHRTLDPYSKLLSERIVFLGTPIDDTSANDVMAQFVYLEHQAPEQDISLYINSPGGSFSAM
TAIYDTMRFVTCDVETVCLGQAASSAAVLLAGGTPGKRLALPGARVLLHQPSVPEPVQGQTSDLVIRAGELLRTREILED
MLVRHTGRSPERVAADIERDKIFDAPAALAYGLIDRIVPSRRASHETPGAR
Nucleotide
Download Length: 636 bp
>NTDB_id=651403 OG485_RS08840 WP_328665592.1 2043104..2043739(+) (clpP) [Streptomyces sp. NBC_00328]
ATGCGCAGCCCGTCCGCCCGCCATGTCCTGCCGGAGTTCACCGAACGCACGAGCTCGGGGCACCGGACCCTGGATCCGTA
CTCGAAGCTGCTCAGCGAGCGGATCGTGTTCCTCGGGACACCGATCGACGACACGTCGGCGAACGACGTGATGGCGCAGT
TCGTGTACCTCGAACACCAGGCGCCCGAGCAGGACATCTCGCTGTACATCAACTCCCCGGGCGGCTCCTTCAGCGCGATG
ACCGCGATCTACGACACGATGCGGTTCGTCACCTGCGACGTGGAGACGGTCTGCCTCGGCCAGGCGGCGTCGTCTGCGGC
CGTCCTGCTGGCCGGCGGCACCCCGGGCAAGCGGCTCGCCCTGCCGGGAGCGCGCGTCCTCCTGCACCAGCCGTCGGTCC
CGGAGCCGGTCCAGGGACAGACGAGCGACCTGGTCATCCGGGCCGGGGAGTTGCTGCGCACCCGCGAGATCCTCGAGGAC
ATGCTCGTACGGCATACGGGGCGGAGCCCGGAGCGGGTCGCCGCGGACATCGAGCGGGACAAGATCTTCGACGCTCCGGC
GGCACTGGCCTACGGGCTGATCGACCGGATCGTCCCGAGCCGCAGGGCCTCGCACGAGACGCCCGGCGCGAGGTGA
ATGCGCAGCCCGTCCGCCCGCCATGTCCTGCCGGAGTTCACCGAACGCACGAGCTCGGGGCACCGGACCCTGGATCCGTA
CTCGAAGCTGCTCAGCGAGCGGATCGTGTTCCTCGGGACACCGATCGACGACACGTCGGCGAACGACGTGATGGCGCAGT
TCGTGTACCTCGAACACCAGGCGCCCGAGCAGGACATCTCGCTGTACATCAACTCCCCGGGCGGCTCCTTCAGCGCGATG
ACCGCGATCTACGACACGATGCGGTTCGTCACCTGCGACGTGGAGACGGTCTGCCTCGGCCAGGCGGCGTCGTCTGCGGC
CGTCCTGCTGGCCGGCGGCACCCCGGGCAAGCGGCTCGCCCTGCCGGGAGCGCGCGTCCTCCTGCACCAGCCGTCGGTCC
CGGAGCCGGTCCAGGGACAGACGAGCGACCTGGTCATCCGGGCCGGGGAGTTGCTGCGCACCCGCGAGATCCTCGAGGAC
ATGCTCGTACGGCATACGGGGCGGAGCCCGGAGCGGGTCGCCGCGGACATCGAGCGGGACAAGATCTTCGACGCTCCGGC
GGCACTGGCCTACGGGCTGATCGACCGGATCGTCCCGAGCCGCAGGGCCTCGCACGAGACGCCCGGCGCGAGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
46.073 |
90.521 |
0.417 |
| clpP | Streptococcus pneumoniae Rx1 |
44.041 |
91.469 |
0.403 |
| clpP | Streptococcus pneumoniae D39 |
44.041 |
91.469 |
0.403 |
| clpP | Streptococcus pneumoniae R6 |
44.041 |
91.469 |
0.403 |
| clpP | Streptococcus pneumoniae TIGR4 |
44.041 |
91.469 |
0.403 |
| clpP | Streptococcus mutans UA159 |
43.523 |
91.469 |
0.398 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
44.444 |
89.573 |
0.398 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
42.784 |
91.943 |
0.393 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.784 |
91.943 |
0.393 |
| clpP | Streptococcus thermophilus LMG 18311 |
42.784 |
91.943 |
0.393 |
| clpP | Streptococcus thermophilus LMD-9 |
42.784 |
91.943 |
0.393 |
| clpP | Streptococcus pyogenes JRS4 |
43.005 |
91.469 |
0.393 |
| clpP | Streptococcus pyogenes MGAS315 |
43.005 |
91.469 |
0.393 |