Detailed information NTG0064965

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: H020_RS0110375
• Genome accession: NZ_AKVY01000001
• Coordinates: 1953880..1954284 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588028.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae TIGR4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1948880..1959284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H020_RS0110330	rnpA	1949294..1949665 (-)	372	WP_000739253.1	ribonuclease P protein component	-
H020_RS14575	-	1949682..1949813 (-)	132	WP_000768904.1	hypothetical protein	-
H020_RS0110340	-	1949814..1951004 (-)	1191	WP_000167757.1	acetate kinase	-
H020_RS0110345	comYH	1951055..1952008 (-)	954	WP_000345135.1	class I SAM-dependent methyltransferase	Machinery gene
H020_RS13165	-	1952069..1952663 (-)	595	Protein_1937	class I SAM-dependent methyltransferase	-
H020_RS0110360	comGG/cglG	1952800..1953213 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
H020_RS0110365	comGF/cglF	1953191..1953652 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
H020_RS0110370	comGE/cglE	1953615..1953917 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
H020_RS0110375	comGD/cglD	1953880..1954284 (-)	405	WP_000588028.1	competence type IV pilus minor pilin ComGD	Machinery gene
H020_RS0110380	comGC/cglC	1954277..1954603 (-)	327	WP_000738627.1	comG operon protein ComGC	Machinery gene
H020_RS0110385	comGB/cglB	1954605..1955621 (-)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
H020_RS0110390	comGA/cglA/cilD	1955569..1956510 (-)	942	WP_000249564.1	competence type IV pilus ATPase ComGA	Machinery gene
H020_RS0110395	-	1956586..1956951 (-)	366	WP_000286415.1	DUF1033 family protein	-
H020_RS0110400	-	1957102..1958160 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14650.83 Da
• Isoelectric Point: 10.2164

>NTDB_id=64965 H020_RS0110375 WP_000588028.1 1953880..1954284(-) (comGD/cglD) [Streptococcus pneumoniae TIGR4]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=64965 H020_RS0110375 WP_000588028.1 1953880..1954284(-) (comGD/cglD) [Streptococcus pneumoniae TIGR4]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	100	100	1
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463