Detailed information NTG0649111

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OHA71_RS42885
• Genome accession: NZ_CP107916
• Coordinates: 9307021..9307656 (-)
• Length: 211 a.a.
• NCBI ID: WP_328441758.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00444
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 9302021..9312656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA71_RS42855 (OHA71_42845)	-	9302679..9303806 (+)	1128	WP_328441755.1	8-amino-7-oxononanoate synthase	-
OHA71_RS42860 (OHA71_42850)	-	9303869..9304093 (-)	225	WP_301978072.1	DUF397 domain-containing protein	-
OHA71_RS42865 (OHA71_42855)	-	9304103..9304972 (-)	870	WP_328441756.1	helix-turn-helix transcriptional regulator	-
OHA71_RS42870 (OHA71_42860)	-	9305185..9305646 (+)	462	WP_328441757.1	ATP-binding protein	-
OHA71_RS42875 (OHA71_42865)	-	9305713..9306186 (-)	474	WP_210571104.1	C40 family peptidase	-
OHA71_RS42880 (OHA71_42870)	-	9306705..9307013 (-)	309	WP_210571105.1	hypothetical protein	-
OHA71_RS42885 (OHA71_42875)	clpP	9307021..9307656 (-)	636	WP_328441758.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA71_RS42890 (OHA71_42880)	-	9307745..9308029 (+)	285	WP_328441759.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
OHA71_RS42895 (OHA71_42885)	-	9308095..9309093 (-)	999	WP_328441760.1	ABC transporter permease	-
OHA71_RS42900 (OHA71_42890)	-	9309219..9309848 (+)	630	WP_328368897.1	TetR/AcrR family transcriptional regulator	-
OHA71_RS42905 (OHA71_42895)	-	9310000..9310302 (+)	303	WP_210571110.1	urease subunit gamma	-
OHA71_RS42910 (OHA71_42900)	-	9310352..9310663 (+)	312	WP_328441761.1	urease subunit beta	-
OHA71_RS42915 (OHA71_42905)	-	9310656..9312377 (+)	1722	WP_328368901.1	urease subunit alpha	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 23383.69 Da
• Isoelectric Point: 5.3466

>NTDB_id=649111 OHA71_RS42885 WP_328441758.1 9307021..9307656(-) (clpP) [Streptomyces sp. NBC_00444]
MTRPSARYVLPEFTERTSFGQKMMDPYSKLLEERIVFLGTQIDDTSANDVMAQFMHLEYQDPDRDISLYINSPGGSFSAM
SAIYDTLQYVTCDVETICLGQAGASAAVLLAAGTPGKRFALPGARLVIHQPGLPEPIEGQASDLAIHAEELTRIRGRLEE
MLVRHTRRTREQVSADIERDKILTAQQALEYGLVDRIIPSRKATMAPPTGK

Nucleotide

• Length: 636 bp

>NTDB_id=649111 OHA71_RS42885 WP_328441758.1 9307021..9307656(-) (clpP) [Streptomyces sp. NBC_00444]
ATGACCCGACCGTCCGCCCGCTATGTCCTGCCCGAGTTCACGGAGCGCACCAGCTTCGGGCAGAAGATGATGGACCCGTA
CTCGAAGCTGCTGGAGGAGCGGATCGTCTTTCTCGGTACCCAGATCGACGACACTTCGGCGAACGACGTGATGGCGCAGT
TCATGCACCTCGAGTACCAGGACCCCGACCGGGACATCTCGCTCTACATCAACTCCCCCGGCGGCTCCTTCAGCGCGATG
TCGGCGATCTACGACACGCTGCAGTACGTCACCTGCGACGTGGAGACGATCTGCCTGGGCCAGGCGGGCGCGTCCGCCGC
CGTGCTGCTGGCCGCGGGCACACCGGGCAAGCGGTTCGCGCTGCCGGGCGCGCGCTTGGTGATCCATCAGCCGGGGCTGC
CCGAGCCGATCGAGGGACAGGCCAGCGACCTGGCCATCCACGCCGAGGAGTTGACGCGGATCAGGGGCCGCCTGGAGGAG
ATGCTCGTACGGCACACCCGGCGCACGCGTGAGCAGGTGAGCGCGGACATCGAGCGGGACAAGATCCTCACGGCGCAGCA
GGCCCTGGAGTACGGGCTGGTGGACCGGATCATCCCCAGCCGCAAGGCCACCATGGCTCCGCCCACCGGGAAGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	44.211	90.047	0.398
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	43.915	89.573	0.393
clpP	Streptococcus pneumoniae R6	42.487	91.469	0.389
clpP	Streptococcus pneumoniae Rx1	42.487	91.469	0.389
clpP	Streptococcus pneumoniae D39	42.487	91.469	0.389
clpP	Streptococcus pneumoniae TIGR4	42.487	91.469	0.389
clpP	Streptococcus thermophilus LMD-9	41.753	91.943	0.384
clpP	Streptococcus pyogenes MGAS315	41.753	91.943	0.384
clpP	Streptococcus thermophilus LMG 18311	41.753	91.943	0.384
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	41.753	91.943	0.384
clpP	Lactococcus lactis subsp. cremoris KW2	41.753	91.943	0.384
clpP	Streptococcus pyogenes JRS4	41.753	91.943	0.384
clpP	Streptococcus mutans UA159	41.237	91.943	0.379