Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | L1S45_RS04735 | Genome accession | NZ_CP091091 |
| Coordinates | 948436..948756 (-) | Length | 106 a.a. |
| NCBI ID | WP_252604015.1 | Uniprot ID | - |
| Organism | Aeromonas dhakensis strain b2-100 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 943436..953756
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1S45_RS04715 (L1S45_04715) | - | 943741..944418 (-) | 678 | WP_010636284.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| L1S45_RS04720 (L1S45_04720) | - | 944775..945746 (+) | 972 | WP_042051921.1 | response regulator | - |
| L1S45_RS04725 (L1S45_04725) | - | 945819..947216 (-) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| L1S45_RS04730 (L1S45_04730) | galU | 947430..948341 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| L1S45_RS04735 (L1S45_04735) | comEA | 948436..948756 (-) | 321 | WP_252604015.1 | ComEA family DNA-binding protein | Machinery gene |
| L1S45_RS04740 (L1S45_04740) | cysQ | 948923..949693 (+) | 771 | WP_252604016.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| L1S45_RS04745 (L1S45_04745) | - | 949772..950068 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| L1S45_RS04750 (L1S45_04750) | - | 950093..950656 (-) | 564 | WP_005309592.1 | septation protein A | - |
| L1S45_RS04755 (L1S45_04755) | - | 950761..952266 (-) | 1506 | WP_252604017.1 | pyridoxal-dependent decarboxylase | - |
| L1S45_RS04760 (L1S45_04760) | - | 952484..953119 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11213.05 Da Isoelectric Point: 9.5773
>NTDB_id=647600 L1S45_RS04735 WP_252604015.1 948436..948756(-) (comEA) [Aeromonas dhakensis strain b2-100]
MNYKTLTTTLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTTTLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=647600 L1S45_RS04735 WP_252604015.1 948436..948756(-) (comEA) [Aeromonas dhakensis strain b2-100]
ATGAACTACAAGACCCTGACCACCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGTCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTCGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCACCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGTCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTCGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.472 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |