Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SPYOHK_RS07085 Genome accession   NZ_AFRY01000001
Coordinates   402474..402656 (+) Length   60 a.a.
NCBI ID   WP_002988483.1    Uniprot ID   -
Organism   Streptococcus pyogenes HKU QMH11M0907901     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 397474..407656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYOHK_RS07110 (SPYOHK_01965) - 398189..399313 (+) 1125 WP_002988467.1 Fic family protein -
  SPYOHK_RS07105 (SPYOHK_01970) entC3 399561..400343 (+) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  SPYOHK_RS07100 (SPYOHK_01975) - 400456..400590 (+) 135 WP_002988476.1 hypothetical protein -
  SPYOHK_RS07095 (SPYOHK_01980) speC 400658..401365 (-) 708 WP_002988478.1 streptococcal pyrogenic exotoxin SpeC -
  SPYOHK_RS07090 (SPYOHK_01985) mf2 401476..402234 (-) 759 WP_002985324.1 DNase Mf2 -
  SPYOHK_RS07085 (SPYOHK_01990) prx 402474..402656 (+) 183 WP_002988483.1 hypothetical protein Regulator
  SPYOHK_RS07080 (SPYOHK_01995) uvrA 402883..405711 (+) 2829 WP_002988487.1 excinuclease ABC subunit UvrA -
  SPYOHK_RS07075 (SPYOHK_02000) - 405827..406900 (+) 1074 WP_002988490.1 M24 family metallopeptidase -
  SPYOHK_RS07070 (SPYOHK_02005) - 406935..407396 (+) 462 WP_002988493.1 deoxycytidylate deaminase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6952.00 Da        Isoelectric Point: 3.9017

>NTDB_id=64639 SPYOHK_RS07085 WP_002988483.1 402474..402656(+) (prx) [Streptococcus pyogenes HKU QMH11M0907901]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPDEPVRPWEVMTVEVVGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=64639 SPYOHK_RS07085 WP_002988483.1 402474..402656(+) (prx) [Streptococcus pyogenes HKU QMH11M0907901]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCCGATGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGTGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

76.667

100

0.767

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517


Multiple sequence alignment