Detailed information NTG0646103

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: L1A13_RS00235
• Genome accession: NZ_CP090889
• Coordinates: 38539..38943 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain CH2439
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 33539..43943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1A13_RS00210 (L1A13_00210)	-	34663..35721 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
L1A13_RS00215 (L1A13_00215)	-	35872..36237 (+)	366	WP_000286415.1	DUF1033 family protein	-
L1A13_RS00220 (L1A13_00220)	comGA/cglA/cilD	36313..37254 (+)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
L1A13_RS00225 (L1A13_00225)	comGB/cglB	37202..38218 (+)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
L1A13_RS00230 (L1A13_00230)	comGC/cglC	38220..38546 (+)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
L1A13_RS00235 (L1A13_00235)	comGD/cglD	38539..38943 (+)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
L1A13_RS00240 (L1A13_00240)	comGE/cglE	38906..39208 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
L1A13_RS00245 (L1A13_00245)	comGF/cglF	39171..39632 (+)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
L1A13_RS00250 (L1A13_00250)	comGG/cglG	39610..40023 (+)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
L1A13_RS00255 (L1A13_00255)	-	40160..40754 (+)	595	Protein_35	methyltransferase domain-containing protein	-
L1A13_RS00260 (L1A13_00260)	comYH	40815..41768 (+)	954	WP_000345099.1	class I SAM-dependent methyltransferase	Machinery gene
L1A13_RS00265 (L1A13_00265)	-	41819..43009 (+)	1191	WP_000167765.1	acetate kinase	-
L1A13_RS10345	-	43010..43141 (+)	132	WP_000768904.1	hypothetical protein	-
L1A13_RS00270 (L1A13_00270)	rnpA	43158..43529 (+)	372	WP_000739244.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=646103 L1A13_RS00235 WP_000588013.1 38539..38943(+) (comGD/cglD) [Streptococcus pneumoniae strain CH2439]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=646103 L1A13_RS00235 WP_000588013.1 38539..38943(+) (comGD/cglD) [Streptococcus pneumoniae strain CH2439]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47