Detailed information NTG0645804

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: L1A15_RS10500
• Genome accession: NZ_CP090884
• Coordinates: 521662..522102 (-)
• Length: 146 a.a.
• NCBI ID: WP_001808911.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain MD5403
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 516662..527102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1A15_RS02720 (L1A15_02720)	-	517130..517468 (+)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-
L1A15_RS02725 (L1A15_02725)	comE/blpR	517473..518210 (+)	738	WP_001219127.1	response regulator transcription factor	Regulator
L1A15_RS02730 (L1A15_02730)	-	518224..519564 (+)	1341	WP_001017622.1	sensor histidine kinase	-
L1A15_RS02735 (L1A15_02735)	blpC	519606..519761 (-)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
L1A15_RS02740 (L1A15_02740)	-	519818..521179 (-)	1362	WP_001069092.1	bacteriocin secretion accessory protein	-
L1A15_RS10495	comA/nlmT	521190..521678 (-)	489	WP_307774349.1	ATP-binding cassette domain-containing protein	Regulator
L1A15_RS10500	comA/nlmT	521662..522102 (-)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
L1A15_RS10505	comA/nlmT	522092..522817 (-)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
L1A15_RS10510	comA/nlmT	522762..523349 (-)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
L1A15_RS02750 (L1A15_02750)	blpI	523631..523828 (+)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
L1A15_RS02755 (L1A15_02755)	cipB	524295..524444 (+)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
L1A15_RS02760 (L1A15_02760)	-	524548..524667 (+)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
L1A15_RS02765 (L1A15_02765)	-	525453..525836 (+)	384	WP_000877381.1	hypothetical protein	-
L1A15_RS02770 (L1A15_02770)	-	525888..526577 (+)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-
L1A15_RS02775 (L1A15_02775)	blpZ	526619..526867 (+)	249	WP_000276499.1	immunity protein BlpZ	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16438.75 Da
• Isoelectric Point: 6.8794

>NTDB_id=645804 L1A15_RS10500 WP_001808911.1 521662..522102(-) (comA/nlmT) [Streptococcus pneumoniae strain MD5403]
MSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKSLAPSY

Nucleotide

• Length: 441 bp

>NTDB_id=645804 L1A15_RS10500 WP_001808911.1 521662..522102(-) (comA/nlmT) [Streptococcus pneumoniae strain MD5403]
ATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAAGTCTTGCGCCGTCATATTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (86-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	71.127	97.26	0.692
comA	Streptococcus mitis NCTC 12261	63.38	97.26	0.616
comA	Streptococcus pneumoniae TIGR4	61.972	97.26	0.603
comA	Streptococcus pneumoniae Rx1	61.972	97.26	0.603
comA	Streptococcus pneumoniae D39	61.972	97.26	0.603
comA	Streptococcus pneumoniae R6	61.972	97.26	0.603
comA	Streptococcus mitis SK321	61.972	97.26	0.603
comA	Streptococcus gordonii str. Challis substr. CH1	59.028	98.63	0.582