Detailed information NTG0645197

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L0994_RS01095
• Genome accession: NZ_CP090847
• Coordinates: 237387..238391 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain WXL032
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 232387..243391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0994_RS01065 (L0994_01060)	zapB	232557..232799 (+)	243	WP_010435362.1	cell division protein ZapB	-
L0994_RS01070 (L0994_01065)	rraA	232906..233424 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
L0994_RS01075 (L0994_01070)	-	233498..234415 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L0994_RS01080 (L0994_01075)	hslU	234571..235911 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
L0994_RS01085 (L0994_01080)	hslV	235970..236518 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
L0994_RS01090 (L0994_01085)	-	236725..237264 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
L0994_RS01095 (L0994_01090)	cytR	237387..238391 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
L0994_RS01100 (L0994_01095)	priA	238632..240833 (-)	2202	WP_010435346.1	primosomal protein N'	-
L0994_RS01105 (L0994_01100)	rpmE	241165..241383 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
L0994_RS01110 (L0994_01105)	-	241715..243004 (+)	1290	WP_016798666.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=645197 L0994_RS01095 WP_010435348.1 237387..238391(-) (cytR) [Vibrio cyclitrophicus strain WXL032]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=645197 L0994_RS01095 WP_010435348.1 237387..238391(-) (cytR) [Vibrio cyclitrophicus strain WXL032]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTCGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874