Detailed information NTG0064490

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: STRSA0001_RS00965
• Genome accession: NZ_ACLO01000018
• Coordinates: 10807..11397 (-)
• Length: 196 a.a.
• NCBI ID: WP_002883818.1
• Uniprot ID: A0AB33ZFD4
• Organism: Streptococcus salivarius SK126
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 5807..16397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STRSA0001_RS00935 (STRSA0001_1721)	-	6019..6783 (-)	765	WP_002883723.1	ABC transporter ATP-binding protein	-
STRSA0001_RS00940 (STRSA0001_1722)	-	6786..7736 (-)	951	WP_002883720.1	branched-chain amino acid ABC transporter permease	-
STRSA0001_RS00945 (STRSA0001_1723)	-	7740..8624 (-)	885	WP_002883743.1	branched-chain amino acid ABC transporter permease	-
STRSA0001_RS00950 (STRSA0001_1724)	-	8668..9843 (-)	1176	WP_002883756.1	ABC transporter substrate-binding protein	-
STRSA0001_RS00955 (STRSA0001_1725)	-	9998..10279 (-)	282	WP_002883763.1	DUF2129 domain-containing protein	-
STRSA0001_RS00960 (STRSA0001_1726)	-	10272..10721 (-)	450	WP_002883748.1	YlbF family regulator	-
STRSA0001_RS00965 (STRSA0001_1727)	clpP	10807..11397 (-)	591	WP_002883818.1	ATP-dependent Clp protease proteolytic subunit	Regulator
STRSA0001_RS00970 (STRSA0001_1728)	upp	11571..12200 (-)	630	WP_002883819.1	uracil phosphoribosyltransferase	-
STRSA0001_RS00975 (STRSA0001_1729)	-	12290..15205 (-)	2916	WP_002883797.1	glycoside hydrolase family 68 protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21533.57 Da
• Isoelectric Point: 4.4829

>NTDB_id=64490 STRSA0001_RS00965 WP_002883818.1 10807..11397(-) (clpP) [Streptococcus salivarius SK126]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK

Nucleotide

• Length: 591 bp

>NTDB_id=64490 STRSA0001_RS00965 WP_002883818.1 10807..11397(-) (clpP) [Streptococcus salivarius SK126]
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTACGATATTTACTCACGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATCGCCCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCCGTTTCGGCAGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACACTTGCTCAAGACACGTAATAACTTGGAGCAAATCTTGGCAGATAATTCTGGACAA
CCAATTGAAAAAGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCTCAAGAAACGCTTGAATATGGTTTTATCGA
TGAAATCATGGCTAATAACCAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus thermophilus LMG 18311	98.98	100	0.99
clpP	Streptococcus thermophilus LMD-9	98.98	100	0.99
clpP	Streptococcus pneumoniae Rx1	93.846	99.49	0.934
clpP	Streptococcus pneumoniae D39	93.846	99.49	0.934
clpP	Streptococcus pneumoniae R6	93.846	99.49	0.934
clpP	Streptococcus pneumoniae TIGR4	93.846	99.49	0.934
clpP	Streptococcus pyogenes JRS4	90.306	100	0.903
clpP	Streptococcus pyogenes MGAS315	90.306	100	0.903
clpP	Streptococcus mutans UA159	88.265	100	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.755	100	0.878
clpP	Lactococcus lactis subsp. cremoris KW2	87.245	100	0.872
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	100	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571