Detailed information NTG0640530

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LXF01_RS01495
• Genome accession: NZ_CP090067
• Coordinates: 319681..320739 (+)
• Length: 352 a.a.
• NCBI ID: WP_078192532.1
• Uniprot ID: -
• Organism: Acinetobacter sp. SH20PTE14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 314681..325739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXF01_RS01480 (LXF01_01480)	mraY	314922..316040 (+)	1119	WP_078189386.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
LXF01_RS01485 (LXF01_01485)	-	316118..316921 (+)	804	WP_180106972.1	methyltransferase domain-containing protein	-
LXF01_RS01490 (LXF01_01490)	ponA	316975..319515 (-)	2541	WP_233944943.1	penicillin-binding protein PBP1a	-
LXF01_RS01495 (LXF01_01495)	comM	319681..320739 (+)	1059	WP_078192532.1	pilus assembly protein PilM	Machinery gene
LXF01_RS01500 (LXF01_01500)	pilN	320739..321425 (+)	687	WP_078189382.1	PilN domain-containing protein	Machinery gene
LXF01_RS01505 (LXF01_01505)	pilO	321422..322144 (+)	723	WP_233944944.1	type 4a pilus biogenesis protein PilO	Machinery gene
LXF01_RS01510 (LXF01_01510)	pilP	322141..322668 (+)	528	WP_078192530.1	pilus assembly protein PilP	Machinery gene
LXF01_RS01515 (LXF01_01515)	pilQ	322730..324844 (+)	2115	WP_233945411.1	type IV pilus secretin PilQ	Machinery gene
LXF01_RS01520 (LXF01_01520)	aroK	324881..325426 (+)	546	WP_078189378.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38940.56 Da
• Isoelectric Point: 4.4858

>NTDB_id=640530 LXF01_RS01495 WP_078192532.1 319681..320739(+) (comM) [Acinetobacter sp. SH20PTE14]
MLRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDCLERAINLANTQTTNAAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARAEVIQL
AGLTPKIGDVESFAIENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYALSFEE
AGRAKKTRALPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=640530 LXF01_RS01495 WP_078192532.1 319681..320739(+) (comM) [Acinetobacter sp. SH20PTE14]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTTTTGGAACT
TTCTGTAAAGAGTGGGCGGTATTGGGTAGAAAGCTATGCTTTGGTGCCATTACCAGAAGGAAGTGTTGTTGAAAAGAACA
TATTGAATCCGGAAGCTGTCGGTGACTGTTTAGAGCGCGCAATTAATTTGGCCAATACGCAGACCACTAATGCAGCTTTG
GCGGTTCCAACGTCGATGGTGATTACAAAAATCATCGAAATGGACGCAGATATGAACGATGATGAACGTGAAATTCAGAT
TCGTGATGATGCTGAGCAATATATTCCGTTCCCACTTGATGAAGCGAGCCTTGATTTTGAGGTCTTGCCAGATCGTCTGT
CCAACCCAAATCGTGTCAATGTTTTGCTTGTCGCTACGCGTATTGAAAATGTTGAAGCGCGTGCGGAAGTCATTCAGCTT
GCTGGTCTTACACCAAAAATTGGTGATGTAGAAAGCTTTGCAATTGAAAATGCATTTAAAGTTTTCTCAGATACTTTGCC
AATGGGTGTGAATACCGTGGGTATTTTAGATATTGGTCATAGTATGACGACCTTATCTGTCATGCAGAATAACAAAGTGA
TTTATACCCGTGAGCAAGTGTTTGGTGGCAAACAATTGACACAGGAAATTCAAAATCGCTATGCATTGTCTTTCGAGGAA
GCAGGTCGAGCGAAAAAAACACGTGCCTTGCCAGATGATTATGATATCGAAGTCTTAGAACCCTTCTTAGAAGCTGTCGT
TCAACAAGCAGCACGTTCTTTACAGTTCTTTTTCTCATCTTCACAGTTCAACGAAATTGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCGGGGCTTGCAAAATTACTTCAACAAAAATTGGGTTACCGCGTCACGATTGCCAATCCATTCTTA
CAAATGGGTTTTTCACCTCAAATTGATATTAAAAAAATTGAAAATGATGCCTCATCACTCATGGTGGCATGCGGTCTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	40.678	100	0.409