Detailed information NTG0063854

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: U064_RS07745
• Genome accession: NC_022911
• Coordinates: 1577833..1579272 (-)
• Length: 479 a.a.
• NCBI ID: WP_023592662.1
• Uniprot ID: V5NPV1
• Organism: Helicobacter pylori BM012S
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1572833..1584272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U064_RS07720 (U064_1544)	recG	1573965..1575836 (-)	1872	WP_023592659.1	ATP-dependent DNA helicase RecG	-
U064_RS07725 (U064_1545)	-	1575918..1576265 (+)	348	WP_000837033.1	hypothetical protein	-
U064_RS07730 (U064_1546)	-	1576269..1576904 (+)	636	WP_023592660.1	outer membrane protein	-
U064_RS07735 (U064_1547)	-	1576901..1577653 (-)	753	WP_023592661.1	exodeoxyribonuclease III	-
U064_RS07745 (U064_1549)	comH	1577833..1579272 (-)	1440	WP_023592662.1	hypothetical protein	Machinery gene
U064_RS07755 (U064_1550)	dnaA	1579501..1580868 (-)	1368	WP_023592663.1	chromosomal replication initiator protein DnaA	-
U064_RS07760 (U064_1551)	-	1581020..1581556 (+)	537	WP_023592664.1	purine-nucleoside phosphorylase	-
U064_RS07765 (U064_1552)	-	1581603..1581842 (+)	240	WP_000462051.1	DUF2443 family protein	-
U064_RS07770 (U064_1553)	glmS	1581843..1583636 (+)	1794	WP_023592666.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55028.98 Da
• Isoelectric Point: 6.8743

>NTDB_id=63854 U064_RS07745 WP_023592662.1 1577833..1579272(-) (comH) [Helicobacter pylori BM012S]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDYKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKEPHSHQMPSLNAPMQKPQNKPHSSQQSSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKIRPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADINEHNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=63854 U064_RS07745 WP_023592662.1 1577833..1579272(-) (comH) [Helicobacter pylori BM012S]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTATAAAGAGCCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACTCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAATCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGACCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACACCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACGGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGATGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: V5NPV1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.868	100	0.969