Detailed information NTG0638309

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: LRS65_RS13340
• Genome accession: NZ_CP089601
• Coordinates: 2611587..2612168 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991612.1
• Uniprot ID: A0AAN4HHP4
• Organism: Bacillus cereus strain C-1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2606587..2617168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRS65_RS13310 (LRS65_13290)	-	2607213..2607713 (-)	501	WP_127063999.1	HIT family protein	-
LRS65_RS13315 (LRS65_13295)	-	2607805..2607975 (-)	171	WP_033689096.1	hypothetical protein	-
LRS65_RS13320 (LRS65_13300)	-	2608190..2608426 (+)	237	WP_000283220.1	hypothetical protein	-
LRS65_RS13325 (LRS65_13305)	-	2608480..2609316 (-)	837	WP_001084759.1	proline/glycine betaine ABC transporter permease	-
LRS65_RS13330 (LRS65_13310)	-	2609309..2610514 (-)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
LRS65_RS13335 (LRS65_13315)	-	2610686..2611543 (+)	858	WP_001227614.1	glycine betaine ABC transporter substrate-binding protein	-
LRS65_RS13340 (LRS65_13320)	clpP	2611587..2612168 (-)	582	WP_000991612.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
LRS65_RS13345 (LRS65_13325)	-	2612190..2612876 (-)	687	WP_000337507.1	RNA polymerase subunit sigma-70	-
LRS65_RS13350 (LRS65_13330)	-	2613019..2613339 (+)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
LRS65_RS13355 (LRS65_13335)	rpiA	2613344..2614006 (+)	663	WP_001049982.1	ribose 5-phosphate isomerase A	-
LRS65_RS13360 (LRS65_13340)	-	2614118..2614552 (+)	435	WP_001190883.1	GNAT family N-acetyltransferase	-
LRS65_RS13365 (LRS65_13345)	-	2614680..2616047 (-)	1368	WP_001065147.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21250.48 Da
• Isoelectric Point: 4.9174

>NTDB_id=638309 LRS65_RS13340 WP_000991612.1 2611587..2612168(-) (clpP) [Bacillus cereus strain C-1]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=638309 LRS65_RS13340 WP_000991612.1 2611587..2612168(-) (clpP) [Bacillus cereus strain C-1]
ATGAATGCAATTCCATATGTAGTGGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGTATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCCGGCGGATCAACGACAGCGGGATTTGCTATATTAGATACA
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	69.11	98.964	0.684
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus pyogenes JRS4	55.556	97.927	0.544
clpP	Streptococcus pyogenes MGAS315	55.556	97.927	0.544
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	97.927	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	97.927	0.497