Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | YBT1518_RS15315 | Genome accession | NC_022873 |
| Coordinates | 3041491..3042072 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991612.1 | Uniprot ID | A0AAN4HHP4 |
| Organism | Bacillus thuringiensis YBT-1518 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3036491..3047072
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YBT1518_RS15285 (YBT1518_15345) | - | 3037117..3037596 (-) | 480 | WP_023522158.1 | HIT family protein | - |
| YBT1518_RS15290 (YBT1518_15350) | - | 3037710..3037877 (-) | 168 | WP_000508401.1 | hypothetical protein | - |
| YBT1518_RS37115 (YBT1518_15355) | - | 3038095..3038330 (+) | 236 | Protein_3037 | hypothetical protein | - |
| YBT1518_RS15300 (YBT1518_15360) | - | 3038384..3039220 (-) | 837 | WP_001084752.1 | proline/glycine betaine ABC transporter permease | - |
| YBT1518_RS15305 (YBT1518_15365) | - | 3039213..3040418 (-) | 1206 | WP_023522160.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| YBT1518_RS15310 (YBT1518_15370) | - | 3040590..3041447 (+) | 858 | WP_001227615.1 | glycine betaine ABC transporter substrate-binding protein | - |
| YBT1518_RS15315 (YBT1518_15375) | clpP | 3041491..3042072 (-) | 582 | WP_000991612.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| YBT1518_RS15320 (YBT1518_15380) | - | 3042094..3042780 (-) | 687 | WP_023522161.1 | RNA polymerase subunit sigma-70 | - |
| YBT1518_RS15325 (YBT1518_15385) | - | 3042923..3043243 (+) | 321 | WP_001125388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| YBT1518_RS15330 (YBT1518_15390) | rpiA | 3043248..3043910 (+) | 663 | WP_023522162.1 | ribose 5-phosphate isomerase A | - |
| YBT1518_RS15340 (YBT1518_15400) | - | 3044091..3044880 (+) | 790 | WP_099046434.1 | IS5 family transposase | - |
| YBT1518_RS15345 | - | 3044924..3045307 (+) | 384 | WP_043924674.1 | GNAT family N-acetyltransferase | - |
| YBT1518_RS15350 (YBT1518_15415) | - | 3045435..3046802 (-) | 1368 | WP_023522165.1 | lytic polysaccharide monooxygenase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21250.48 Da Isoelectric Point: 4.9174
>NTDB_id=63624 YBT1518_RS15315 WP_000991612.1 3041491..3042072(-) (clpP) [Bacillus thuringiensis YBT-1518]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=63624 YBT1518_RS15315 WP_000991612.1 3041491..3042072(-) (clpP) [Bacillus thuringiensis YBT-1518]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCCGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGGTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCCGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGGTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
69.11 |
98.964 |
0.684 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.725 |
97.927 |
0.663 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae Rx1 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae D39 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae R6 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes JRS4 |
55.556 |
97.927 |
0.544 |
| clpP | Streptococcus pyogenes MGAS315 |
55.556 |
97.927 |
0.544 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.794 |
97.927 |
0.497 |