Detailed information NTG0634186

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LRO84_RS01575
• Genome accession: NZ_CP088955
• Coordinates: 335461..336519 (+)
• Length: 352 a.a.
• NCBI ID: WP_198496579.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain ARu19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 330461..341519

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO84_RS01560 (LRO84_01560)	-	331524..331856 (+)	333	WP_231762417.1	hypothetical protein	-
LRO84_RS01565 (LRO84_01565)	-	331859..332683 (+)	825	WP_231762418.1	putative RNA methyltransferase	-
LRO84_RS01570 (LRO84_01570)	ponA	332738..335299 (-)	2562	WP_231762419.1	penicillin-binding protein PBP1a	-
LRO84_RS01575 (LRO84_01575)	pilM	335461..336519 (+)	1059	WP_198496579.1	pilus assembly protein PilM	Machinery gene
LRO84_RS01580 (LRO84_01580)	pilN	336519..337160 (+)	642	WP_231762420.1	PilN domain-containing protein	Machinery gene
LRO84_RS01585 (LRO84_01585)	pilO	337157..337906 (+)	750	WP_231762421.1	type 4a pilus biogenesis protein PilO	Machinery gene
LRO84_RS01590 (LRO84_01590)	pilP	337917..338444 (+)	528	WP_045433419.1	pilus assembly protein PilP	Machinery gene
LRO84_RS01595 (LRO84_01595)	pilQ	338507..340660 (+)	2154	WP_209831804.1	type IV pilus secretin PilQ family protein	Machinery gene
LRO84_RS01600 (LRO84_01600)	aroK	340672..341241 (+)	570	WP_003653807.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39048.67 Da
• Isoelectric Point: 4.4217

>NTDB_id=634186 LRO84_RS01575 WP_198496579.1 335461..336519(+) (pilM) [Acinetobacter calcoaceticus strain ARu19]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQSGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=634186 LRO84_RS01575 WP_198496579.1 335461..336519(+) (pilM) [Acinetobacter calcoaceticus strain ARu19]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAGGCAGTTGCGGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAATGATGATGAGCGAGAAGTTCAGAT
TCGATTAGATGCGGAGCAGTATATACCGTTCCCTTTGGATGAAGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CTAATCCAAACCGCGTGAATGTACTTTTAGTTGCAACAAGAACAGAAAATGTTGAAACACGAGTAGAAGTGCTGGAACTG
GTGGACTTAACTCCTAAGCTTGCTGATGTAGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTGCC
AATGGGTGCAAATACCATTGGTATTTTAGATATCGGCCATACCATGACGACATTATCGGTTATGCAAAGTGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGCAAACAGCTGACTTTGGAAATTCAAAGTCGCTATGGCCTGTCTTTAGAGGAA
GCGGGACGGGCTAAAAAAGAGCGCTCTTTACCAGATGATTATGACATCGAAATCTTAGAGCCATTTCTTGATGCTGTAGT
GCAGCAAGCAGCTAGATCTCTACAATTTTTCTTCTCTTCATCACAATTTAATGAAATTGACCATATTTTACTTGCTGGTG
GGAATGCCAATATTCCTGGGCTTGCTAAATTGTTGCAGCAAAAACTTGGTTACCGTGTGACCATTGCCAATCCGTTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCGTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42