Detailed information NTG0634144

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LRO55_RS01505
• Genome accession: NZ_CP088954
• Coordinates: 317817..318875 (+)
• Length: 352 a.a.
• NCBI ID: WP_056482436.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain ACa13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 312817..323875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO55_RS01490 (LRO55_01490)	-	313879..314211 (+)	333	WP_003653820.1	hypothetical protein	-
LRO55_RS01495 (LRO55_01495)	-	314214..315038 (+)	825	WP_231764482.1	putative RNA methyltransferase	-
LRO55_RS01500 (LRO55_01500)	ponA	315093..317654 (-)	2562	WP_231764483.1	penicillin-binding protein PBP1a	-
LRO55_RS01505 (LRO55_01505)	comM	317817..318875 (+)	1059	WP_056482436.1	pilus assembly protein PilM	Machinery gene
LRO55_RS01510 (LRO55_01510)	pilN	318875..319516 (+)	642	WP_017390950.1	PilN domain-containing protein	Machinery gene
LRO55_RS01515 (LRO55_01515)	pilO	319513..320262 (+)	750	WP_045433421.1	type 4a pilus biogenesis protein PilO	Machinery gene
LRO55_RS01520 (LRO55_01520)	pilP	320273..320800 (+)	528	WP_003653811.1	pilus assembly protein PilP	Machinery gene
LRO55_RS01525 (LRO55_01525)	pilQ	320863..322977 (+)	2115	WP_231764484.1	type IV pilus secretin PilQ family protein	Machinery gene
LRO55_RS01530 (LRO55_01530)	aroK	322989..323558 (+)	570	WP_003653807.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38988.62 Da
• Isoelectric Point: 4.4217

>NTDB_id=634144 LRO55_RS01505 WP_056482436.1 317817..318875(+) (comM) [Acinetobacter calcoaceticus strain ACa13]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYLVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=634144 LRO55_RS01505 WP_056482436.1 317817..318875(+) (comM) [Acinetobacter calcoaceticus strain ACa13]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTTGGTGGAAAGCTATGCTTTGATGCCTTTACCCGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAGGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAATGATGATGAACGAGAAGTTCAGAT
TCGATTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAAGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CTAATCCAAACCGCGTGAATGTACTTTTAGTTGCAACAAGAACAGAAAATGTTGAAACACGAGTAGAAGTGCTGGAACTG
GTGGACTTAACTCCTAAGCTTGCTGATGTAGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTGCC
AATGGGTGCAAATACCATTGGTATTTTAGATATCGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTATGGTTTGTCTTTAGAAGAA
GCGGGACGGGCTAAAAAAGAGCGCTCTTTACCAGATGATTATGATATTGAAGTCTTAGAGCCATTTCTTGATGCTGTCGT
GCAGCAAGCAGCTAGATCTCTACAATTTTTCTTCTCTTCATCACAATTCAATGAAATTGACCATATTTTACTAGCAGGAG
GGAATGCCAATATTCCTGGGCTTGCCAAATTGTTGCAGCAAAAGCTTGGTTACCGTGTGACCATTGCCAATCCGTTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCGTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	96.591	100	0.966
pilM	Acinetobacter baumannii D1279779	96.591	100	0.966
comM	Acinetobacter baylyi ADP1	81.818	100	0.818
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423