Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   N7J24_RS03355 Genome accession   NZ_CP104749
Coordinates   591117..591296 (+) Length   59 a.a.
NCBI ID   WP_000965651.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain TAH 10/84 dUdp     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 586117..596296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7J24_RS03305 (N7J24_03305) - 586608..586760 (+) 153 WP_000391486.1 hypothetical protein -
  N7J24_RS03310 (N7J24_03310) - 586771..587187 (+) 417 WP_001870768.1 DUF1366 domain-containing protein -
  N7J24_RS03315 (N7J24_03315) - 587250..587411 (+) 162 WP_000222555.1 hypothetical protein -
  N7J24_RS03320 (N7J24_03320) - 587421..587711 (+) 291 WP_000564986.1 hypothetical protein -
  N7J24_RS03325 (N7J24_03325) - 587713..587964 (+) 252 WP_000611525.1 phage holin -
  N7J24_RS03330 (N7J24_03330) - 588084..589277 (+) 1194 WP_000143381.1 glucosaminidase domain-containing protein -
  N7J24_RS03335 (N7J24_03335) - 589643..590158 (+) 516 WP_000837684.1 hypothetical protein -
  N7J24_RS03340 (N7J24_03340) - 590286..590486 (+) 201 WP_000076712.1 CsbD family protein -
  N7J24_RS03345 (N7J24_03345) - 590527..590697 (-) 171 WP_000356856.1 hypothetical protein -
  N7J24_RS03350 (N7J24_03350) - 590833..590958 (-) 126 WP_017646884.1 hypothetical protein -
  N7J24_RS03355 (N7J24_03355) prx 591117..591296 (+) 180 WP_000965651.1 hypothetical protein Regulator
  N7J24_RS03360 (N7J24_03360) - 591702..591899 (+) 198 WP_001290370.1 hypothetical protein -
  N7J24_RS03365 (N7J24_03365) - 591943..592875 (-) 933 WP_000254064.1 dihydroorotate oxidase -
  N7J24_RS03370 (N7J24_03370) - 593061..594296 (-) 1236 WP_001185382.1 aminoacyltransferase -
  N7J24_RS03375 (N7J24_03375) - 594315..595526 (-) 1212 WP_000285509.1 aminoacyltransferase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 7035.07 Da        Isoelectric Point: 4.3690

>NTDB_id=632897 N7J24_RS03355 WP_000965651.1 591117..591296(+) (prx) [Streptococcus agalactiae strain TAH 10/84 dUdp]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPHEKVREEEVVTVERVEDVMRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=632897 N7J24_RS03355 WP_000965651.1 591117..591296(+) (prx) [Streptococcus agalactiae strain TAH 10/84 dUdp]
ATGTTATACATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGATG
TTATGAGAGAATTGGAGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS315

66.102

100

0.661
  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61
  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508
  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508