Detailed information NTG0631188

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LPS07_RS01510
• Genome accession: NZ_CP087716
• Coordinates: 321689..322747 (+)
• Length: 352 a.a.
• NCBI ID: WP_069120207.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP2044
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 316689..327747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPS07_RS01495 (LPS07_01495)	-	317715..318047 (+)	333	WP_002116981.1	DUF7709 family protein	-
LPS07_RS01500 (LPS07_01500)	rrmA	318050..318874 (+)	825	WP_081318661.1	putative RNA methyltransferase	-
LPS07_RS01505 (LPS07_01505)	ponA	318966..321527 (-)	2562	WP_069120210.1	penicillin-binding protein PBP1a	-
LPS07_RS01510 (LPS07_01510)	comM	321689..322747 (+)	1059	WP_069120207.1	pilus assembly protein PilM	Machinery gene
LPS07_RS01515 (LPS07_01515)	pilN	322747..323388 (+)	642	WP_069120205.1	PilN domain-containing protein	Machinery gene
LPS07_RS01520 (LPS07_01520)	pilO	323385..324137 (+)	753	WP_069120201.1	type 4a pilus biogenesis protein PilO	Machinery gene
LPS07_RS01525 (LPS07_01525)	pilP	324148..324675 (+)	528	WP_069120199.1	pilus assembly protein PilP	Machinery gene
LPS07_RS01530 (LPS07_01530)	pilQ	324738..326864 (+)	2127	WP_069120196.1	type IV pilus secretin PilQ	Machinery gene
LPS07_RS01535 (LPS07_01535)	aroK	326876..327445 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39010.61 Da
• Isoelectric Point: 4.5028

>NTDB_id=631188 LPS07_RS01510 WP_069120207.1 321689..322747(+) (comM) [Acinetobacter pittii strain AP2044]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFG

Nucleotide

• Length: 1059 bp

>NTDB_id=631188 LPS07_RS01510 WP_069120207.1 321689..322747(+) (comM) [Acinetobacter pittii strain AP2044]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TTTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGTGTAGAAGTATTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACTATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GTAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGGTTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	96.296	99.716	0.96
pilM	Acinetobacter baumannii D1279779	96.296	99.716	0.96
comM	Acinetobacter baylyi ADP1	81.197	99.716	0.81
pilM	Legionella pneumophila strain ERS1305867	42.165	99.716	0.42