Detailed information NTG0626609

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HQN46_RS13375
• Genome accession: NZ_CP087103
• Coordinates: 2631807..2632388 (-)
• Length: 193 a.a.
• NCBI ID: WP_144467111.1
• Uniprot ID: -
• Organism: Bacillus toyonensis strain HA0190
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2626807..2637388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQN46_RS13345 (HQN46_0013345)	-	2627425..2627910 (-)	486	Protein_2562	HIT family protein	-
HQN46_RS13350 (HQN46_0013350)	-	2628026..2628154 (-)	129	WP_226534195.1	septum formation initiator	-
HQN46_RS13355 (HQN46_0013355)	-	2628414..2628650 (+)	237	WP_000283214.1	hypothetical protein	-
HQN46_RS13360 (HQN46_0013360)	-	2628699..2629535 (-)	837	WP_001084772.1	ABC transporter permease	-
HQN46_RS13365 (HQN46_0013365)	-	2629528..2630733 (-)	1206	WP_000370604.1	quaternary amine ABC transporter ATP-binding protein	-
HQN46_RS13370 (HQN46_0013370)	-	2630905..2631762 (+)	858	WP_001227651.1	glycine betaine ABC transporter substrate-binding protein	-
HQN46_RS13375 (HQN46_0013375)	clpP	2631807..2632388 (-)	582	WP_144467111.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
HQN46_RS13380 (HQN46_0013380)	-	2632410..2633096 (-)	687	WP_085450254.1	RNA polymerase subunit sigma-70	-
HQN46_RS13385 (HQN46_0013385)	-	2633240..2633560 (+)	321	WP_001125384.1	2Fe-2S iron-sulfur cluster-binding protein	-
HQN46_RS13390 (HQN46_0013390)	rpiA	2633565..2634227 (+)	663	WP_001050006.1	ribose 5-phosphate isomerase A	-
HQN46_RS13395 (HQN46_0013395)	-	2634342..2634776 (+)	435	WP_001190873.1	GNAT family N-acetyltransferase	-
HQN46_RS13400 (HQN46_0013400)	exsF	2635429..2635932 (+)	504	WP_000953228.1	exosporium protein ExsF	-
HQN46_RS13405 (HQN46_0013405)	-	2636229..2636693 (+)	465	WP_144467110.1	exosporium protein D	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21267.47 Da
• Isoelectric Point: 4.8002

>NTDB_id=626609 HQN46_RS13375 WP_144467111.1 2631807..2632388(-) (clpP) [Bacillus toyonensis strain HA0190]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGE
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=626609 HQN46_RS13375 WP_144467111.1 2631807..2632388(-) (clpP) [Bacillus toyonensis strain HA0190]
ATGAATGCAATTCCATATGTAGTAGAGCAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGAATTATTATTATCGGTTCAGAAATTAACGATCAAGTAGCGAGTAGTGTTGTAGCTCAATTATTATTTCTAGAAGCGG
AAGATGCAGAGAAAGATATATATTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCAATATTAGATACA
ATGAACTTAATTAAACCAGACGTGCAAACACTTTGTATGGGATTTGCAGCATCATTTGGTGCGTTGTTACTCTTATCAGG
TGCAAAAGGAAAACGATTTGCATTGCCTAACAGTGAAATTATGATTCATCAACCGCTTGGTGGTGCGCAAGGGCAGGCAA
CTGAAATCGAAATAACAGCAAAAAGAATTTTAAAGCTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGGAA
CCGATTGAAAGGGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAGGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	53.439	97.927	0.523
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	97.927	0.503