Detailed information NTG0618677

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: HQG80_RS13405
• Genome accession: NZ_CP085506
• Coordinates: 2621415..2621996 (-)
• Length: 193 a.a.
• NCBI ID: WP_001092372.1
• Uniprot ID: A0A9W5R6W8
• Organism: Bacillus cereus strain HD2.4
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2616415..2626996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQG80_RS13375 (HQG80_013375)	-	2617041..2617541 (-)	501	WP_127063999.1	HIT family protein	-
HQG80_RS13380 (HQG80_013380)	-	2617633..2617800 (-)	168	WP_020480301.1	hypothetical protein	-
HQG80_RS13385 (HQG80_013385)	-	2618018..2618206 (+)	189	WP_017656461.1	hypothetical protein	-
HQG80_RS13390 (HQG80_013390)	-	2618308..2619144 (-)	837	WP_001084759.1	proline/glycine betaine ABC transporter permease	-
HQG80_RS13395 (HQG80_013395)	-	2619137..2620342 (-)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
HQG80_RS13400 (HQG80_013400)	-	2620514..2621371 (+)	858	WP_017656462.1	glycine betaine ABC transporter substrate-binding protein	-
HQG80_RS13405 (HQG80_013405)	clpP	2621415..2621996 (-)	582	WP_001092372.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
HQG80_RS13410 (HQG80_013410)	-	2622018..2622704 (-)	687	WP_000337509.1	RNA polymerase subunit sigma-70	-
HQG80_RS13415 (HQG80_013415)	-	2622847..2623167 (+)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
HQG80_RS13420 (HQG80_013420)	rpiA	2623172..2623834 (+)	663	WP_001049982.1	ribose 5-phosphate isomerase A	-
HQG80_RS13425 (HQG80_013425)	-	2623946..2624380 (+)	435	WP_001190883.1	GNAT family N-acetyltransferase	-
HQG80_RS13430 (HQG80_013430)	-	2624508..2625875 (-)	1368	WP_048538311.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21238.47 Da
• Isoelectric Point: 5.0776

>NTDB_id=618677 HQG80_RS13405 WP_001092372.1 2621415..2621996(-) (clpP) [Bacillus cereus strain HD2.4]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=618677 HQG80_RS13405 WP_001092372.1 2621415..2621996(-) (clpP) [Bacillus cereus strain HD2.4]
ATGAATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTTCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus pyogenes JRS4	56.614	97.927	0.554
clpP	Streptococcus pyogenes MGAS315	56.614	97.927	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	97.927	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	97.927	0.497