Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   NQD70_RS04105 Genome accession   NZ_CP101991
Coordinates   728548..728727 (+) Length   59 a.a.
NCBI ID   WP_000965642.1    Uniprot ID   Q8E0V9
Organism   Streptococcus agalactiae strain BCJB4361     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 723548..733727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQD70_RS04055 (NQD70_04055) - 724339..724665 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  NQD70_RS04060 (NQD70_04060) - 724640..724852 (+) 213 WP_000698337.1 hypothetical protein -
  NQD70_RS04065 (NQD70_04065) - 724865..725167 (+) 303 WP_000215499.1 hypothetical protein -
  NQD70_RS04070 (NQD70_04070) - 725169..725504 (+) 336 WP_001001959.1 phage holin -
  NQD70_RS04075 (NQD70_04075) - 725506..726225 (+) 720 WP_000236381.1 peptidoglycan amidohydrolase family protein -
  NQD70_RS04080 (NQD70_04080) - 726421..727317 (+) 897 WP_001061853.1 sensor histidine kinase -
  NQD70_RS04085 (NQD70_04085) - 727311..727610 (+) 300 WP_000258211.1 STAS-like domain-containing protein -
  NQD70_RS04090 (NQD70_04090) - 727720..727920 (+) 201 WP_000076712.1 CsbD family protein -
  NQD70_RS04095 (NQD70_04095) - 727961..728131 (-) 171 WP_000356856.1 hypothetical protein -
  NQD70_RS04100 (NQD70_04100) - 728267..728392 (-) 126 WP_017285425.1 hypothetical protein -
  NQD70_RS04105 (NQD70_04105) prx 728548..728727 (+) 180 WP_000965642.1 hypothetical protein Regulator
  NQD70_RS04110 (NQD70_04110) - 729008..729397 (-) 390 Protein_727 site-specific integrase -
  NQD70_RS04115 (NQD70_04115) - 729433..729699 (-) 267 WP_001872365.1 hypothetical protein -
  NQD70_RS04120 (NQD70_04120) - 729705..731082 (+) 1378 Protein_729 IS3 family transposase -
  NQD70_RS04125 (NQD70_04125) - 731255..731416 (-) 162 WP_000508795.1 TM2 domain-containing protein -
  NQD70_RS04130 (NQD70_04130) - 732159..733436 (+) 1278 WP_000594361.1 ABC transporter permease -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6842.78 Da        Isoelectric Point: 4.3085

>NTDB_id=613963 NQD70_RS04105 WP_000965642.1 728548..728727(+) (prx) [Streptococcus agalactiae strain BCJB4361]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVRDDEVVTVESVEEVLRELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=613963 NQD70_RS04105 WP_000965642.1 728548..728727(+) (prx) [Streptococcus agalactiae strain BCJB4361]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTGCCGCACGAGGAAGTGAGAGATGATGAAGTTGTGACAGTTGAGAGTGTAGAAGAGG
TGTTGAGGGAATTGAAGTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E0V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.586

98.305

0.763

  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729

  prx Streptococcus pyogenes MGAS315

68.966

98.305

0.678

  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678

  prx Streptococcus pyogenes MGAS315

67.241

98.305

0.661

  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542

  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542